BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O05 (855 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC107700-1|AAI07701.1| 93|Homo sapiens SFRS18 protein protein. 36 0.25 BC064640-1|AAH64640.1| 269|Homo sapiens SFRS18 protein protein. 36 0.25 BC064413-1|AAH64413.1| 274|Homo sapiens SFRS18 protein protein. 36 0.25 BC052638-1|AAH52638.1| 256|Homo sapiens SFRS18 protein protein. 36 0.25 BC042850-1|AAH42850.1| 269|Homo sapiens SFRS18 protein protein. 36 0.25 BC019074-1|AAH19074.1| 270|Homo sapiens C6orf111 protein protein. 36 0.25 BC012780-1|AAH12780.1| 504|Homo sapiens C6orf111 protein protein. 36 0.25 BC007791-1|AAH07791.1| 257|Homo sapiens C6orf111 protein protein. 36 0.25 AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein. 36 0.25 AK074628-1|BAC11098.1| 520|Homo sapiens protein ( Homo sapiens ... 36 0.25 AK027898-1|BAB55440.1| 499|Homo sapiens protein ( Homo sapiens ... 36 0.25 AK027658-1|BAB55273.1| 413|Homo sapiens protein ( Homo sapiens ... 36 0.25 AF314186-1|AAL76165.1| 500|Homo sapiens SR rich protein protein. 36 0.25 AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein. 36 0.25 Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV ... 33 1.3 X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 ... 33 1.3 D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen prot... 33 1.3 AC073149-2|AAY24061.1| 365|Homo sapiens unknown protein. 33 1.3 >BC107700-1|AAI07701.1| 93|Homo sapiens SFRS18 protein protein. Length = 93 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWLLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >BC064640-1|AAH64640.1| 269|Homo sapiens SFRS18 protein protein. Length = 269 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >BC064413-1|AAH64413.1| 274|Homo sapiens SFRS18 protein protein. Length = 274 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >BC052638-1|AAH52638.1| 256|Homo sapiens SFRS18 protein protein. Length = 256 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >BC042850-1|AAH42850.1| 269|Homo sapiens SFRS18 protein protein. Length = 269 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >BC019074-1|AAH19074.1| 270|Homo sapiens C6orf111 protein protein. Length = 270 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >BC012780-1|AAH12780.1| 504|Homo sapiens C6orf111 protein protein. Length = 504 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >BC007791-1|AAH07791.1| 257|Homo sapiens C6orf111 protein protein. Length = 257 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >AL513550-4|CAI17194.1| 805|Homo sapiens RP11-98I9.2 protein. Length = 805 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >AK074628-1|BAC11098.1| 520|Homo sapiens protein ( Homo sapiens cDNA FLJ90147 fis, clone HEMBB1001847, weakly similar to NEUROGENIC PROTEIN BIG BRAIN. ). Length = 520 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >AK027898-1|BAB55440.1| 499|Homo sapiens protein ( Homo sapiens cDNA FLJ14992 fis, clone Y79AA1001805. ). Length = 499 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >AK027658-1|BAB55273.1| 413|Homo sapiens protein ( Homo sapiens cDNA FLJ14752 fis, clone NT2RP3003071. ). Length = 413 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >AF314186-1|AAL76165.1| 500|Homo sapiens SR rich protein protein. Length = 500 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >AF314184-1|AAL76163.1| 805|Homo sapiens SR rich protein protein. Length = 805 Score = 35.5 bits (78), Expect = 0.25 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 5/36 (13%) Frame = +3 Query: 222 QWALNPTAYQNV-----DCSEVDWAALAQQWIAMKE 314 QW LN + D S++DWAALAQ WIA +E Sbjct: 11 QWPLNQQQWMQSFQHQQDPSQIDWAALAQAWIAQRE 46 >Y17397-1|CAA76763.1| 1690|Homo sapiens collagen alpha 4 type IV protein. Length = 1690 Score = 33.1 bits (72), Expect = 1.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 592 PDMEGPVASGCTGNPSIKGKVGSEGTFGS 506 P M GP GC G P + G+ G +G GS Sbjct: 1397 PGMRGPPGPGCKGEPGLDGRRGVDGVPGS 1425 >X81053-1|CAA56943.1| 1690|Homo sapiens type IV collagen alpha 4 chain protein. Length = 1690 Score = 33.1 bits (72), Expect = 1.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 592 PDMEGPVASGCTGNPSIKGKVGSEGTFGS 506 P M GP GC G P + G+ G +G GS Sbjct: 1397 PGMRGPPGPGCKGEPGLDGRRGVDGVPGS 1425 >D17391-1|BAA04214.1| 472|Homo sapiens alpha 4(IV) collagen protein. Length = 472 Score = 33.1 bits (72), Expect = 1.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 592 PDMEGPVASGCTGNPSIKGKVGSEGTFGS 506 P M GP GC G P + G+ G +G GS Sbjct: 179 PGMRGPPGPGCKGEPGLDGRRGVDGVPGS 207 >AC073149-2|AAY24061.1| 365|Homo sapiens unknown protein. Length = 365 Score = 33.1 bits (72), Expect = 1.3 Identities = 13/29 (44%), Positives = 16/29 (55%) Frame = -3 Query: 592 PDMEGPVASGCTGNPSIKGKVGSEGTFGS 506 P M GP GC G P + G+ G +G GS Sbjct: 72 PGMRGPSGPGCKGEPGLDGRRGVDGVPGS 100 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 128,286,116 Number of Sequences: 237096 Number of extensions: 3159898 Number of successful extensions: 7360 Number of sequences better than 10.0: 18 Number of HSP's better than 10.0 without gapping: 6328 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7340 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10872716010 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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