BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O05 (855 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical pr... 32 0.60 AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 32 0.60 U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 31 1.0 Z68337-3|CAA92750.2| 712|Caenorhabditis elegans Hypothetical pr... 30 1.8 AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 30 1.8 X75331-1|CAA53080.1| 620|Caenorhabditis elegans acetylcholinest... 28 9.7 U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal acetyl... 28 9.7 AC006675-6|AAK84556.2| 433|Caenorhabditis elegans Nuclear hormo... 28 9.7 >Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical protein Y69H2.2 protein. Length = 907 Score = 31.9 bits (69), Expect = 0.60 Identities = 12/19 (63%), Positives = 13/19 (68%) Frame = -3 Query: 592 PDMEGPVASGCTGNPSIKG 536 PD E PVAS CT NP + G Sbjct: 337 PDCENPVASACTPNPCVNG 355 >AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical protein Y53H1A.1 protein. Length = 613 Score = 31.9 bits (69), Expect = 0.60 Identities = 12/23 (52%), Positives = 16/23 (69%) Frame = +3 Query: 246 YQNVDCSEVDWAALAQQWIAMKE 314 +Q VDWA LAQQW+AM++ Sbjct: 8 HQAQPAESVDWAQLAQQWMAMRD 30 >U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein B0280.13 protein. Length = 616 Score = 31.1 bits (67), Expect = 1.0 Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 2/44 (4%) Frame = +3 Query: 498 GHGDPKVP--SEPTLPLIDGFPVQPDATGPSISGYTTAAGSGPT 623 G PKV S+P +P+I G P+ PD T S S + + S T Sbjct: 254 GRNKPKVEDVSQPIVPVITGDPLNPDWTSNSTSSMSASFRSSST 297 >Z68337-3|CAA92750.2| 712|Caenorhabditis elegans Hypothetical protein M7.3 protein. Length = 712 Score = 30.3 bits (65), Expect = 1.8 Identities = 11/38 (28%), Positives = 20/38 (52%) Frame = +1 Query: 553 FPCNLMQLDLPYQAIQQQRGVDLHFNMGTGQLHKLINK 666 F CN+M + P Q ++Q+RG+ + G + + K Sbjct: 382 FDCNMMDIHYPVQQLEQERGIQVTCKRKNGDIMTITMK 419 >AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical protein Y53C10A.10 protein. Length = 1582 Score = 30.3 bits (65), Expect = 1.8 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%) Frame = +3 Query: 495 PGHGDPKVPSEPTLPLIDG--FPVQPDATGPSISG 593 PG P PS+P P +G PV+P +GPS +G Sbjct: 977 PGPSGPNGPSDPNKPSPNGPSDPVKPSPSGPSPNG 1011 >X75331-1|CAA53080.1| 620|Caenorhabditis elegans acetylcholinesterase protein. Length = 620 Score = 27.9 bits (59), Expect = 9.7 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 Query: 367 KEKPPWRWKIPKTTPMYSCLQ 429 K K PWR + TTP SC+Q Sbjct: 64 KPKQPWRIPLNATTPPNSCIQ 84 >U58731-1|AAB00593.1| 620|Caenorhabditis elegans Abnormal acetylcholinesterase protein1 protein. Length = 620 Score = 27.9 bits (59), Expect = 9.7 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +1 Query: 367 KEKPPWRWKIPKTTPMYSCLQ 429 K K PWR + TTP SC+Q Sbjct: 64 KPKQPWRIPLNATTPPNSCIQ 84 >AC006675-6|AAK84556.2| 433|Caenorhabditis elegans Nuclear hormone receptor familyprotein 98 protein. Length = 433 Score = 27.9 bits (59), Expect = 9.7 Identities = 21/92 (22%), Positives = 47/92 (51%), Gaps = 1/92 (1%) Frame = -1 Query: 669 MFVDQLVELSSTHVEM*VHSPLLLYSLIWKVQLHQVARETRRSKVK*VRKELLDLHDLAN 490 + ++ +++L TH E L +I ++ HQV ++ + + +K V K L + + Sbjct: 323 ILINAMLDLEPTHEE--------LSYMICQLCFHQVGKKLQGNILKTVEKLQEVLSNNLH 374 Query: 489 PIPIDSMNRPRNS-LMSSTLHLEATVHRCCFR 397 ++ MN+P+ S ++ + + TV +C +R Sbjct: 375 DYYVNQMNQPKYSKRIARMMKINNTVEQCLYR 406 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 19,049,190 Number of Sequences: 27780 Number of extensions: 428982 Number of successful extensions: 1204 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 1045 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1203 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2129473654 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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