Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O05
         (855 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    25   0.89 
AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase ...    24   1.6  
AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase ...    24   1.6  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    23   3.6  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    23   3.6  

>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 25.0 bits (52), Expect = 0.89
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -2

Query: 284 CRPVDFTAVHILIGRWIQGPLGGISWI 204
           C  + F  V+ L+G W+ GP    +WI
Sbjct: 76  CLVMTFAGVNDLLGYWVFGPRFCDTWI 102


>AF213012-1|AAG43568.1|  492|Apis mellifera acetylcholinesterase
           protein.
          Length = 492

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +3

Query: 150 LLNHSIIQPKMYSNKDAANPGYPTQWALNPTAYQNVDC 263
           +LN +++    Y  +    PG+P +   NP    + DC
Sbjct: 89  VLNATVLPNSCYQERYEYFPGFPGEEMWNPNTNISEDC 126


>AB181702-1|BAE06051.1|  628|Apis mellifera acetylcholinesterase
           protein.
          Length = 628

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +3

Query: 150 LLNHSIIQPKMYSNKDAANPGYPTQWALNPTAYQNVDC 263
           +LN +++    Y  +    PG+P +   NP    + DC
Sbjct: 89  VLNATVLPNSCYQERYEYFPGFPGEEMWNPNTNISEDC 126


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 445 HQRIPGAVHGINGDGVGQVMEIQKFLPNLL 534
           +Q  P +    NGDG+G +  I++ L + L
Sbjct: 33  YQVYPRSFKDSNGDGIGDIEGIKEKLDHFL 62


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = +1

Query: 445 HQRIPGAVHGINGDGVGQVMEIQKFLPNLL 534
           +Q  P +    NGDG+G +  I++ L + L
Sbjct: 33  YQVYPRSFKDSNGDGIGDIEGIKEKLDHFL 62


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 234,745
Number of Sequences: 438
Number of extensions: 5565
Number of successful extensions: 13
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27552579
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)