BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O04 (998 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_UPI00005A301A Cluster: PREDICTED: similar to SWI/SNF re... 34 6.6 UniRef50_Q4RMY5 Cluster: Chromosome 6 SCAF15017, whole genome sh... 34 6.6 UniRef50_Q96GM5-2 Cluster: Isoform 2 of Q96GM5 ; n=5; Euarchonto... 33 8.7 UniRef50_Q96GM5 Cluster: SWI/SNF-related matrix-associated actin... 33 8.7 >UniRef50_UPI00005A301A Cluster: PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 isoform 1 isoform 8; n=2; Canis lupus familiaris|Rep: PREDICTED: similar to SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3 isoform 1 isoform 8 - Canis familiaris Length = 496 Score = 33.9 bits (74), Expect = 6.6 Identities = 26/81 (32%), Positives = 35/81 (43%) Frame = +2 Query: 215 SXPQNPXXNXPLYYXYSQPSXNRKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATX 394 S QN P S+ + RK + KIL Q + L+P SQ Y L+ F KL+ T Sbjct: 66 SQAQNQGQPVPTAPARSRSAKRRK--MADKILPQRIRELVPESQAYMDLLAFERKLDQTI 123 Query: 395 NAQTVSXXQKCXXTPHKXXTK 457 + V Q+ P K K Sbjct: 124 MRKRVD-IQEALKRPMKQKRK 143 >UniRef50_Q4RMY5 Cluster: Chromosome 6 SCAF15017, whole genome shotgun sequence; n=3; Euteleostomi|Rep: Chromosome 6 SCAF15017, whole genome shotgun sequence - Tetraodon nigroviridis (Green puffer) Length = 621 Score = 33.9 bits (74), Expect = 6.6 Identities = 19/58 (32%), Positives = 29/58 (50%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXT 454 ++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K T Sbjct: 74 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKVAT 130 >UniRef50_Q96GM5-2 Cluster: Isoform 2 of Q96GM5 ; n=5; Euarchontoglires|Rep: Isoform 2 of Q96GM5 - Homo sapiens (Human) Length = 435 Score = 33.5 bits (73), Expect = 8.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391 +K ++ KIL Q + L+P SQ Y L+ F KL+ T Sbjct: 85 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 121 >UniRef50_Q96GM5 Cluster: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1; n=125; Eumetazoa|Rep: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 - Homo sapiens (Human) Length = 476 Score = 33.5 bits (73), Expect = 8.7 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391 +K ++ KIL Q + L+P SQ Y L+ F KL+ T Sbjct: 85 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 121 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 308,036,100 Number of Sequences: 1657284 Number of extensions: 2173729 Number of successful extensions: 2633 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 2595 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2631 length of database: 575,637,011 effective HSP length: 101 effective length of database: 408,251,327 effective search space used: 94306056537 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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