BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O04 (998 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_9982| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.010 >SB_9982| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 252 Score = 38.3 bits (85), Expect = 0.010 Identities = 18/40 (45%), Positives = 25/40 (62%) Frame = +2 Query: 272 SXNRKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391 S +RK ++ K+L Q V L+P SQ Y L+ F KL+AT Sbjct: 39 SRSRKKKMADKVLPQRVRDLVPESQAYMDLLAFERKLDAT 78 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 9,553,498 Number of Sequences: 59808 Number of extensions: 67924 Number of successful extensions: 49 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 48 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 49 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2979300250 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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