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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O04
         (998 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66617-1|AAC50695.1|  435|Homo sapiens SWI/SNF complex 60 KDa su...    33   1.2  
BC110350-1|AAI10351.1|  470|Homo sapiens SWI/SNF related, matrix...    33   1.2  
BC009368-1|AAH09368.3|  476|Homo sapiens SWI/SNF related, matrix...    33   1.2  
BC002628-1|AAH02628.1|  470|Homo sapiens SWI/SNF related, matrix...    33   1.2  
AY450431-1|AAR88511.1|  470|Homo sapiens 60kDa BRG-1/Brm associa...    33   1.2  
AY450430-1|AAR88510.1|  483|Homo sapiens 60kDa BRG-1/Brm associa...    33   1.2  
AF109733-1|AAD23390.1|  453|Homo sapiens SWI/SNF-related, matrix...    33   1.2  
AC005486-2|AAS02031.1|  300|Homo sapiens unknown protein.              33   1.2  
U66619-1|AAC50697.1|  469|Homo sapiens SWI/SNF complex 60 KDa su...    33   1.6  
U66618-1|AAC50696.1|  475|Homo sapiens SWI/SNF complex 60 KDa su...    32   3.7  
BC142963-1|AAI42964.1|  531|Homo sapiens SMARCD2 protein protein.      32   3.7  

>U66617-1|AAC50695.1|  435|Homo sapiens SWI/SNF complex 60 KDa
           subunit protein.
          Length = 435

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
           +K ++  KIL Q +  L+P SQ Y  L+ F  KL+ T
Sbjct: 85  KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 121


>BC110350-1|AAI10351.1|  470|Homo sapiens SWI/SNF related, matrix
           associated, actin dependent regulator of chromatin, sub
           protein.
          Length = 470

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
           ++ ++  KIL Q +  L+P SQ Y  L+ F  KL+ T   + V   Q+    P K   K
Sbjct: 86  KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143


>BC009368-1|AAH09368.3|  476|Homo sapiens SWI/SNF related, matrix
           associated, actin dependent regulator of chromatin, sub
           protein.
          Length = 476

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
           +K ++  KIL Q +  L+P SQ Y  L+ F  KL+ T
Sbjct: 85  KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 121


>BC002628-1|AAH02628.1|  470|Homo sapiens SWI/SNF related, matrix
           associated, actin dependent regulator of chromatin, sub
           protein.
          Length = 470

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
           ++ ++  KIL Q +  L+P SQ Y  L+ F  KL+ T   + V   Q+    P K   K
Sbjct: 86  KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143


>AY450431-1|AAR88511.1|  470|Homo sapiens 60kDa BRG-1/Brm associated
           factor subunit c isoform 1 protein.
          Length = 470

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
           ++ ++  KIL Q +  L+P SQ Y  L+ F  KL+ T   + V   Q+    P K   K
Sbjct: 86  KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143


>AY450430-1|AAR88510.1|  483|Homo sapiens 60kDa BRG-1/Brm associated
           factor subunit c isoform 2 protein.
          Length = 483

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
           ++ ++  KIL Q +  L+P SQ Y  L+ F  KL+ T   + V   Q+    P K   K
Sbjct: 99  KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 156


>AF109733-1|AAD23390.1|  453|Homo sapiens SWI/SNF-related,
           matrix-associated, actin-dependent regulator of
           chromatin D1 protein.
          Length = 453

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
           +K ++  KIL Q +  L+P SQ Y  L+ F  KL+ T
Sbjct: 62  KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 98


>AC005486-2|AAS02031.1|  300|Homo sapiens unknown protein.
          Length = 300

 Score = 33.5 bits (73), Expect = 1.2
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
           ++ ++  KIL Q +  L+P SQ Y  L+ F  KL+ T   + V   Q+    P K   K
Sbjct: 86  KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143


>U66619-1|AAC50697.1|  469|Homo sapiens SWI/SNF complex 60 KDa
           subunit protein.
          Length = 469

 Score = 33.1 bits (72), Expect = 1.6
 Identities = 19/59 (32%), Positives = 29/59 (49%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
           ++ ++  KIL Q +  L+P SQ Y  L+ F  KL+ T   + V   Q+    P K   K
Sbjct: 85  KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKGVD-IQEALKRPMKQKRK 142


>U66618-1|AAC50696.1|  475|Homo sapiens SWI/SNF complex 60 KDa
           subunit protein.
          Length = 475

 Score = 31.9 bits (69), Expect = 3.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
           ++ ++  K+L Q +  L+P SQ Y  L+ F  KL+ T
Sbjct: 80  KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQT 116


>BC142963-1|AAI42964.1|  531|Homo sapiens SMARCD2 protein protein.
          Length = 531

 Score = 31.9 bits (69), Expect = 3.7
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
           ++ ++  K+L Q +  L+P SQ Y  L+ F  KL+ T
Sbjct: 136 KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQT 172


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,487,736
Number of Sequences: 237096
Number of extensions: 335589
Number of successful extensions: 302
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13323281566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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