BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O04 (998 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa su... 33 1.2 BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix... 33 1.2 BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix... 33 1.2 BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix... 33 1.2 AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associa... 33 1.2 AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associa... 33 1.2 AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related, matrix... 33 1.2 AC005486-2|AAS02031.1| 300|Homo sapiens unknown protein. 33 1.2 U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa su... 33 1.6 U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa su... 32 3.7 BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein. 32 3.7 >U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa subunit protein. Length = 435 Score = 33.5 bits (73), Expect = 1.2 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391 +K ++ KIL Q + L+P SQ Y L+ F KL+ T Sbjct: 85 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 121 >BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, sub protein. Length = 470 Score = 33.5 bits (73), Expect = 1.2 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457 ++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K Sbjct: 86 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143 >BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, sub protein. Length = 476 Score = 33.5 bits (73), Expect = 1.2 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391 +K ++ KIL Q + L+P SQ Y L+ F KL+ T Sbjct: 85 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 121 >BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix associated, actin dependent regulator of chromatin, sub protein. Length = 470 Score = 33.5 bits (73), Expect = 1.2 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457 ++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K Sbjct: 86 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143 >AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associated factor subunit c isoform 1 protein. Length = 470 Score = 33.5 bits (73), Expect = 1.2 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457 ++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K Sbjct: 86 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143 >AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associated factor subunit c isoform 2 protein. Length = 483 Score = 33.5 bits (73), Expect = 1.2 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457 ++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K Sbjct: 99 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 156 >AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related, matrix-associated, actin-dependent regulator of chromatin D1 protein. Length = 453 Score = 33.5 bits (73), Expect = 1.2 Identities = 15/37 (40%), Positives = 22/37 (59%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391 +K ++ KIL Q + L+P SQ Y L+ F KL+ T Sbjct: 62 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 98 >AC005486-2|AAS02031.1| 300|Homo sapiens unknown protein. Length = 300 Score = 33.5 bits (73), Expect = 1.2 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457 ++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K Sbjct: 86 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143 >U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa subunit protein. Length = 469 Score = 33.1 bits (72), Expect = 1.6 Identities = 19/59 (32%), Positives = 29/59 (49%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457 ++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K Sbjct: 85 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKGVD-IQEALKRPMKQKRK 142 >U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa subunit protein. Length = 475 Score = 31.9 bits (69), Expect = 3.7 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391 ++ ++ K+L Q + L+P SQ Y L+ F KL+ T Sbjct: 80 KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQT 116 >BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein. Length = 531 Score = 31.9 bits (69), Expect = 3.7 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = +2 Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391 ++ ++ K+L Q + L+P SQ Y L+ F KL+ T Sbjct: 136 KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQT 172 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 46,487,736 Number of Sequences: 237096 Number of extensions: 335589 Number of successful extensions: 302 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 302 length of database: 76,859,062 effective HSP length: 91 effective length of database: 55,283,326 effective search space used: 13323281566 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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