Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O04
(998 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa su... 33 1.2
BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix... 33 1.2
BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix... 33 1.2
BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix... 33 1.2
AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associa... 33 1.2
AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associa... 33 1.2
AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related, matrix... 33 1.2
AC005486-2|AAS02031.1| 300|Homo sapiens unknown protein. 33 1.2
U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa su... 33 1.6
U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa su... 32 3.7
BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein. 32 3.7
>U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 435
Score = 33.5 bits (73), Expect = 1.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
+K ++ KIL Q + L+P SQ Y L+ F KL+ T
Sbjct: 85 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 121
>BC110350-1|AAI10351.1| 470|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 470
Score = 33.5 bits (73), Expect = 1.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K
Sbjct: 86 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143
>BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 476
Score = 33.5 bits (73), Expect = 1.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
+K ++ KIL Q + L+P SQ Y L+ F KL+ T
Sbjct: 85 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 121
>BC002628-1|AAH02628.1| 470|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 470
Score = 33.5 bits (73), Expect = 1.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K
Sbjct: 86 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143
>AY450431-1|AAR88511.1| 470|Homo sapiens 60kDa BRG-1/Brm associated
factor subunit c isoform 1 protein.
Length = 470
Score = 33.5 bits (73), Expect = 1.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K
Sbjct: 86 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143
>AY450430-1|AAR88510.1| 483|Homo sapiens 60kDa BRG-1/Brm associated
factor subunit c isoform 2 protein.
Length = 483
Score = 33.5 bits (73), Expect = 1.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K
Sbjct: 99 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 156
>AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related,
matrix-associated, actin-dependent regulator of
chromatin D1 protein.
Length = 453
Score = 33.5 bits (73), Expect = 1.2
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
+K ++ KIL Q + L+P SQ Y L+ F KL+ T
Sbjct: 62 KKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQT 98
>AC005486-2|AAS02031.1| 300|Homo sapiens unknown protein.
Length = 300
Score = 33.5 bits (73), Expect = 1.2
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K
Sbjct: 86 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVD-IQEALKRPMKQKRK 143
>U66619-1|AAC50697.1| 469|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 469
Score = 33.1 bits (72), Expect = 1.6
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNATXNAQTVSXXQKCXXTPHKXXTK 457
++ ++ KIL Q + L+P SQ Y L+ F KL+ T + V Q+ P K K
Sbjct: 85 KRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKGVD-IQEALKRPMKQKRK 142
>U66618-1|AAC50696.1| 475|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 475
Score = 31.9 bits (69), Expect = 3.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
++ ++ K+L Q + L+P SQ Y L+ F KL+ T
Sbjct: 80 KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQT 116
>BC142963-1|AAI42964.1| 531|Homo sapiens SMARCD2 protein protein.
Length = 531
Score = 31.9 bits (69), Expect = 3.7
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +2
Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
++ ++ K+L Q + L+P SQ Y L+ F KL+ T
Sbjct: 136 KRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQT 172
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 46,487,736
Number of Sequences: 237096
Number of extensions: 335589
Number of successful extensions: 302
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 299
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 76,859,062
effective HSP length: 91
effective length of database: 55,283,326
effective search space used: 13323281566
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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