Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O04
         (998 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069383-1|AAL39528.1|  515|Drosophila melanogaster LD09078p pro...    37   0.050
AF071503-1|AAC28455.1|  515|Drosophila melanogaster brahma assoc...    37   0.050
AE014298-1855|AAF48235.1|  515|Drosophila melanogaster CG4303-PA...    37   0.050

>AY069383-1|AAL39528.1|  515|Drosophila melanogaster LD09078p
           protein.
          Length = 515

 Score = 36.7 bits (81), Expect = 0.050
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
           +K +L  KIL Q V  L+P SQ Y  L+ F  KL+AT
Sbjct: 126 KKKKLAEKILPQKVRDLVPESQAYMDLLTFERKLDAT 162


>AF071503-1|AAC28455.1|  515|Drosophila melanogaster brahma
           associated protein 60 kDa protein.
          Length = 515

 Score = 36.7 bits (81), Expect = 0.050
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
           +K +L  KIL Q V  L+P SQ Y  L+ F  KL+AT
Sbjct: 126 KKKKLAEKILPQKVRDLVPESQAYMDLLTFERKLDAT 162


>AE014298-1855|AAF48235.1|  515|Drosophila melanogaster CG4303-PA
           protein.
          Length = 515

 Score = 36.7 bits (81), Expect = 0.050
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +2

Query: 281 RKXRLXXKILXQNVPXLIPXSQXYXXLIXFXLKLNAT 391
           +K +L  KIL Q V  L+P SQ Y  L+ F  KL+AT
Sbjct: 126 KKKKLAEKILPQKVRDLVPESQAYMDLLTFERKLDAT 162


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,228,532
Number of Sequences: 53049
Number of extensions: 101852
Number of successful extensions: 108
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 108
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 5058363141
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)