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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O02
         (821 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces...   235   4e-63
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar...   135   8e-33
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch...   130   2e-31
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|...   124   2e-29
SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual        27   2.4  
SPBC19G7.16 |iws1||transcription elongation factor complex subun...    27   3.2  
SPBC56F2.07c |||AAA family ATPase, unknown biological role|Schiz...    27   3.2  
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos...    27   4.3  
SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|c...    26   5.6  
SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1 |Schizos...    26   7.4  
SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr ...    25   9.8  
SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1 |Schiz...    25   9.8  

>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 448

 Score =  235 bits (576), Expect = 4e-63
 Identities = 101/132 (76%), Positives = 117/132 (88%)
 Frame = +2

Query: 62  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYV 241
           MREIVHIQAGQCGNQ+GA FW  I+DEHG+D  G YHG S+ Q ER+NVY+NEA+GGKYV
Sbjct: 1   MREIVHIQAGQCGNQVGAAFWSTIADEHGLDSAGIYHGTSEAQHERLNVYFNEAAGGKYV 60

Query: 242 PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV 421
           PRA+LVDLEPGTMD+V+SG FG +FRPDN ++GQSGAGN WAKGHYTEGAEL D+VLDVV
Sbjct: 61  PRAVLVDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVV 120

Query: 422 RKEAESCDCLQG 457
           R+EAE+CD LQG
Sbjct: 121 RREAEACDALQG 132



 Score =  161 bits (392), Expect = 8e-41
 Identities = 74/100 (74%), Positives = 86/100 (86%)
 Frame = +3

Query: 522 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 701
           KIREEYPDR+M T+SV P+PK SDTVVEPYNATLS+HQLVEN+DET+CIDNEAL  I   
Sbjct: 154 KIREEYPDRMMATFSVAPAPKSSDTVVEPYNATLSMHQLVENSDETFCIDNEALSSIFAN 213

Query: 702 TLKLSTPTYGDLNHLVSLTMSGVTTCXRFPGQLNADLRKL 821
           TLK+ +P+Y DLNHLVS  M+GVTT  RFPG+LN+DLRKL
Sbjct: 214 TLKIKSPSYDDLNHLVSAVMAGVTTSFRFPGELNSDLRKL 253


>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
           2|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 449

 Score =  135 bits (326), Expect = 8e-33
 Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 2/134 (1%)
 Frame = +2

Query: 62  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLER--INVYYNEASGGK 235
           MREI+ I  GQ G QIG   WE+   EHGI P G  + ++  Q      + +++E   GK
Sbjct: 1   MREIISIHVGQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGK 60

Query: 236 YVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLD 415
           YVPR+I VDLEP  +D VR+GP+  +F P+  + G+  A NN+A+GHYT G ELVD V D
Sbjct: 61  YVPRSIYVDLEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTD 120

Query: 416 VVRKEAESCDCLQG 457
            +R+ A++C  LQG
Sbjct: 121 KIRRIADNCSGLQG 134



 Score = 93.9 bits (223), Expect = 2e-20
 Identities = 41/97 (42%), Positives = 62/97 (63%)
 Frame = +3

Query: 522 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 701
           ++  EY  +    +SV P+P+VS +VVEPYN+ L+ H  ++  D T+ +DNE+ YDIC R
Sbjct: 156 RLAMEYTKKSKLQFSVYPAPQVSTSVVEPYNSVLTTHATLDLADCTFMVDNESCYDICRR 215

Query: 702 TLKLSTPTYGDLNHLVSLTMSGVTTCXRFPGQLNADL 812
            L +  P+Y +LN L++  +S +T   RF G LN DL
Sbjct: 216 NLDIERPSYENLNRLIAQVVSSITASLRFEGSLNVDL 252


>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 455

 Score =  130 bits (314), Expect = 2e-31
 Identities = 59/138 (42%), Positives = 86/138 (62%), Gaps = 6/138 (4%)
 Frame = +2

Query: 62  MREIVHIQAGQCGNQIGAKFWEIISDEHGIDPTG------AYHGDSDLQLERINVYYNEA 223
           MRE++ +  GQ G QIG   WE+   EHGI P G        H ++    +    +++E 
Sbjct: 1   MREVISVHVGQAGVQIGNACWELYCLEHGIGPDGFPTENSEVHKNNSYLNDGFGTFFSET 60

Query: 224 SGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVD 403
             GK+VPR+I VDLEP  +D VR+GP+  +F P+  V G+  A NN+A+GHYT G E++D
Sbjct: 61  GQGKFVPRSIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMID 120

Query: 404 SVLDVVRKEAESCDCLQG 457
           SVL+ +R+ A++C  LQG
Sbjct: 121 SVLERIRRMADNCSGLQG 138



 Score =  100 bits (240), Expect = 2e-22
 Identities = 44/99 (44%), Positives = 65/99 (65%)
 Frame = +3

Query: 522 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 701
           ++  EY  +    +SV P+P+VS +VVEPYN+ L+ H  ++N+D T+ +DNEA YDIC R
Sbjct: 160 RLNMEYGKKSNLQFSVYPAPQVSTSVVEPYNSVLTTHATLDNSDCTFMVDNEACYDICRR 219

Query: 702 TLKLSTPTYGDLNHLVSLTMSGVTTCXRFPGQLNADLRK 818
            L +  PTY +LN L++  +S +T   RF G LN DL +
Sbjct: 220 NLDIERPTYENLNRLIAQVVSSITASLRFAGSLNVDLNE 258


>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 446

 Score =  124 bits (299), Expect = 2e-29
 Identities = 52/133 (39%), Positives = 90/133 (67%), Gaps = 2/133 (1%)
 Frame = +2

Query: 65  REIVHIQAGQCGNQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERINVYYNEASGGKYVP 244
           REI+ +QAGQCGNQIG++FW+ +  EHGI P G     +   ++R +V++ ++   +Y+P
Sbjct: 3   REIITLQAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFATEGVDRKDVFFYQSDDTRYIP 62

Query: 245 RAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQS--GAGNNWAKGHYTEGAELVDSVLDV 418
           RAIL+DLEP  ++++ S  +G ++ P+N +  ++  GAGNNWA G Y+    + + ++D+
Sbjct: 63  RAILIDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDM 121

Query: 419 VRKEAESCDCLQG 457
           + +EA+  D L+G
Sbjct: 122 IDREADGSDSLEG 134



 Score = 85.8 bits (203), Expect = 7e-18
 Identities = 43/98 (43%), Positives = 57/98 (58%), Gaps = 1/98 (1%)
 Frame = +3

Query: 522 KIREEYPDRIMNTYSVVP-SPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 698
           ++ + YP +I+ TYSV P S  VSD VV+PYN+ L++ +L  N D    +DN AL  I  
Sbjct: 156 RLNDRYPKKIIQTYSVFPNSQSVSDVVVQPYNSLLALKRLTLNADSVVVLDNAALAHIAA 215

Query: 699 RTLKLSTPTYGDLNHLVSLTMSGVTTCXRFPGQLNADL 812
             L    PT+   N LVS  MS  TT  R+PG +N DL
Sbjct: 216 DRLHTQNPTFHQQNQLVSTVMSASTTTLRYPGYMNNDL 253


>SPAC6C3.08 |||gankyrin|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 234

 Score = 27.5 bits (58), Expect = 2.4
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 365 AKGHYTEGAELVDSVLDVVRKEAESCDCLQGIP 463
           A+GH   G ELV +  D +RK++E+   L+  P
Sbjct: 183 AEGHPDVGVELVRAGADTLRKDSENHTALEVCP 215


>SPBC19G7.16 |iws1||transcription elongation factor complex subunit
           Iws1 |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 428

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = +2

Query: 101 NQIGAKFWEIISDEHGIDPTGAYHGDSDLQLERI 202
           N++G    E+++++  +DPT A   + DLQ++ +
Sbjct: 133 NELGENEEEVLTEQKQLDPTLAAKKELDLQMDAV 166


>SPBC56F2.07c |||AAA family ATPase, unknown biological
           role|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 809

 Score = 27.1 bits (57), Expect = 3.2
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -2

Query: 820 SLRRSAFSCPGNRXHVVTPDMVSDTRWFRSPYVGVDSFSVRKQI 689
           +LR        NR  ++ P ++   R  R  YVG  +F  RKQI
Sbjct: 679 ALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNFEARKQI 722


>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
           Pof11|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 506

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
 Frame = +2

Query: 296 GPFGQIFRPDNFVFGQSGAG-NNWAKGHYTEGAEL 397
           GP+G +F P  F+F  +G    NW+   Y E A L
Sbjct: 157 GPYGTMFLPQQFIFDSNGRPLLNWSY-LYKEHAHL 190


>SPBC15D4.03 |slm9||hira protein Slm9|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 807

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 16/46 (34%), Positives = 23/46 (50%)
 Frame = -3

Query: 438 DSASFRTTSKTESTSSAPSV*CPLAQLLPAPDCPKTKLSGRKICPK 301
           ++A+ RTTS T+    +PS       L P P    +  S R+ CPK
Sbjct: 390 NAAADRTTSPTQGQPESPS---KSILLRPPPSIASSPESKRRKCPK 432


>SPAC23A1.19c ||SPAC26H5.01c|RecQ type DNA helicase Hrq1
            |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1063

 Score = 25.8 bits (54), Expect = 7.4
 Identities = 12/44 (27%), Positives = 20/44 (45%)
 Frame = +2

Query: 317  RPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDC 448
            RP   +F     G++   G   +  E  D ++ +  +  ESCDC
Sbjct: 955  RPSRLIF-YDNCGDSSGAGLCNKAYEHTDELITMAIERIESCDC 997


>SPBC27B12.05 |||WD repeat protein|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 391

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 735 LNHLVSLTMSGVTTCXRFPGQLN 803
           L HLV   + G++ C  +PG+ N
Sbjct: 331 LTHLVDAPLLGMSVCPLYPGEEN 353


>SPAC8F11.09c |nnt1||nicotinamide N-methyltransferase Nnt1
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 255

 Score = 25.4 bits (53), Expect = 9.8
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = -3

Query: 354 PAPDCPKTKLSGRKICPKGPERTESMVPGSKS 259
           P+   PK  L  R I P GPE  +  + GS S
Sbjct: 20  PSTPPPKEVLHTRVIVPNGPEEIKLRLVGSHS 51


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,137,843
Number of Sequences: 5004
Number of extensions: 61412
Number of successful extensions: 200
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 196
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 402440190
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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