Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_O01
(855 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P49821 Cluster: NADH dehydrogenase [ubiquinone] flavopr... 95 3e-18
UniRef50_A1ZAW7 Cluster: CG11423-PA; n=2; Drosophila melanogaste... 91 2e-17
UniRef50_A1Z9Z7 Cluster: CG8102-PA, isoform A; n=4; Sophophora|R... 59 2e-07
UniRef50_Q7XZ61 Cluster: NADH dehydrogenase; n=1; Griffithsia ja... 46 0.002
UniRef50_Q4UKA6 Cluster: NADH-quinone oxidoreductase subunit F; ... 38 0.24
UniRef50_Q1IS37 Cluster: NADH-quinone oxidoreductase, F subunit;... 34 5.3
>UniRef50_P49821 Cluster: NADH dehydrogenase [ubiquinone]
flavoprotein 1, mitochondrial precursor; n=215; cellular
organisms|Rep: NADH dehydrogenase [ubiquinone]
flavoprotein 1, mitochondrial precursor - Homo sapiens
(Human)
Length = 464
Score = 94.7 bits (225), Expect = 3e-18
Identities = 64/208 (30%), Positives = 81/208 (38%)
Frame = +3
Query: 189 TQXPXKNNXGPXAXTXRXXXNXFGQXXWRXKGAXPRGXXFLTKEIXLXGXXXXXXXXKXS 368
T P K + G R N +G+ WR KG+ RG + TKEI L G K S
Sbjct: 24 TTAPKKTSFGSLKDEDRIFTNLYGRHDWRLKGSLSRGDWYKTKEILLKGPDWILGEIKTS 83
Query: 369 XLXXXXXXXXXXXXXWSXXXNPSNGRPKXXVVNXXKGXPVXXKNRKXXLHNPXKLVEGXL 548
L WS PS+GRPK VVN +G P K+R+ H+P KL+EG L
Sbjct: 84 GLRGRGGAGFPTGLKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREILRHDPHKLLEGCL 143
Query: 549 FAGRPMGAQPXIXLXXXVXXXXNXXXCXLLLLXAXQXXPXXXKTLXGPGYXFXNFXXPGV 728
GR MGA+ N + + K G GY F F G
Sbjct: 144 VGGRAMGARAAYIYIR--GEFYNEASNLQVAIREAYEAGLIGKNACGSGYDFDVFVVRGA 201
Query: 729 XXLTXXXEGTAPLXSLXGQXXXPXXXTP 812
E TA + S+ G+ P P
Sbjct: 202 GAYICGEE-TALIESIEGKQGKPRLKPP 228
>UniRef50_A1ZAW7 Cluster: CG11423-PA; n=2; Drosophila
melanogaster|Rep: CG11423-PA - Drosophila melanogaster
(Fruit fly)
Length = 702
Score = 91.5 bits (217), Expect = 2e-17
Identities = 52/133 (39%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 177 PXXQTQXPX-KNNXGPXAXTXRXXXNXFGQXXWRXKGAXPRGXXFLTKEIXLXGXXXXXX 353
P T P K GP A R N +G+ WR K A RG + TKEI G
Sbjct: 242 PPPGTPPPQTKTTFGPLADADRIFTNLYGRHDWRLKAAMKRGDWYKTKEIIAKGDKWIVN 301
Query: 354 XXKXSXLXXXXXXXXXXXXXWSXXXNPSNGRPKXXVVNXXKGXPVXXKNRKXXLHNPXKL 533
K S L WS P +GRPK VVN +G P K+R+ H+P KL
Sbjct: 302 EIKTSGLRGRGGAGFPSGLKWSFMHKPPDGRPKFLVVNADEGEPGTCKDREIMRHDPHKL 361
Query: 534 VEGXLFAGRPMGA 572
VEG L AGR MGA
Sbjct: 362 VEGCLIAGRAMGA 374
>UniRef50_A1Z9Z7 Cluster: CG8102-PA, isoform A; n=4; Sophophora|Rep:
CG8102-PA, isoform A - Drosophila melanogaster (Fruit
fly)
Length = 481
Score = 58.8 bits (136), Expect = 2e-07
Identities = 36/123 (29%), Positives = 45/123 (36%), Gaps = 1/123 (0%)
Frame = +3
Query: 204 KNNXGPXAXTXRXXXNXFGQXXWRXKGAXPRGXXFLTKEIXLXGXXXXXXXXKXSXLXXX 383
K GP R N +G+ WR GA RG T E+ G S L
Sbjct: 52 KTKFGPLDDCDRVFQNLYGRHDWRLHGACQRGDWHRTAELLEQGPEWIMKQVSKSGLRGR 111
Query: 384 XXXXXXXXXXWSXXXNPSNGR-PKXXVVNXXKGXPVXXKNRKXXLHNPXKLVEGXLFAGR 560
W + + PK +VN +G P K+R H P KL+EG L G
Sbjct: 112 GGAGFYAGLKWEFLRQTKSEKVPKMVIVNCAEGEPGTCKDRDILRHEPHKLIEGILLVGV 171
Query: 561 PMG 569
MG
Sbjct: 172 AMG 174
>UniRef50_Q7XZ61 Cluster: NADH dehydrogenase; n=1; Griffithsia
japonica|Rep: NADH dehydrogenase - Griffithsia japonica
(Red alga)
Length = 170
Score = 45.6 bits (103), Expect = 0.002
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 2/116 (1%)
Frame = +3
Query: 216 GPXAXTXRXXXNXFGQXXWRXKGAXPRGXXFLTKEIXLXGXXXXXXXXKX-SXLXXXXXX 392
G + R N + WR KGA RG +TK++ G K
Sbjct: 55 GGLSDKDRIFTNLYRDGDWRLKGAMKRGDWHMTKDLVQMGRSWILSEIKAVRPARRAGAP 114
Query: 393 XXXXXXXWSXXXNPS-NGRPKXXVVNXXKGXPVXXKNRKXXLHNPXKLVEGXLFAG 557
+S + S +GRP VVN + P K+R+ +P KLVEG L G
Sbjct: 115 GFPSGLKYSFMPDGSPDGRPNYLVVNADESEPGTCKDREILRSDPHKLVEGCLLVG 170
>UniRef50_Q4UKA6 Cluster: NADH-quinone oxidoreductase subunit F;
n=11; Proteobacteria|Rep: NADH-quinone oxidoreductase
subunit F - Rickettsia felis (Rickettsia azadi)
Length = 422
Score = 38.3 bits (85), Expect = 0.24
Identities = 31/108 (28%), Positives = 38/108 (35%)
Frame = +3
Query: 249 NXFGQXXWRXKGAXPRGXXFLTKEIXLXGXXXXXXXXKXSXLXXXXXXXXXXXXXWSXXX 428
N GQ K + RG TK + G K S L WS
Sbjct: 11 NLHGQQSHDLKSSKKRGDWDNTKALLDKGREFIIEEVKKSGLRGRGGAGFSTGMKWSFMP 70
Query: 429 NPSNGRPKXXVVNXXKGXPVXXKNRKXXLHNPXKLVEGXLFAGRPMGA 572
S +P VVN + P K+R P KL+EG L A +GA
Sbjct: 71 KNS-AKPCYLVVNADESEPGTCKDRDILRFEPHKLIEGCLLASFAIGA 117
>UniRef50_Q1IS37 Cluster: NADH-quinone oxidoreductase, F subunit;
n=9; Bacteria|Rep: NADH-quinone oxidoreductase, F
subunit - Acidobacteria bacterium (strain Ellin345)
Length = 439
Score = 33.9 bits (74), Expect = 5.3
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +3
Query: 414 WSXXXNPSNGRPKXXVVNXXKGXPVXXKNRKXXLHNPXKLVEGXLFAGRPMGAQ 575
WS S +PK + N + P K+R H+P ++EG + AG +GA+
Sbjct: 71 WSFVPKES-AKPKYILCNGDESEPGTCKDRLIFEHDPHGVIEGAIIAGLAVGAK 123
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 389,700,197
Number of Sequences: 1657284
Number of extensions: 3750394
Number of successful extensions: 2522
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2442
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2519
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 75423184424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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