Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O01
         (855 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1481 + 26860051-26860104,26861114-26861143,26861714-26863174     72   7e-13

>07_03_1481 + 26860051-26860104,26861114-26861143,26861714-26863174
          Length = 514

 Score = 71.7 bits (168), Expect = 7e-13
 Identities = 61/221 (27%), Positives = 76/221 (34%)
 Frame = +3

Query: 150 AXXVNNXPVPXXQTQXPXKNNXGPXAXTXRXXXNXFGQXXWRXKGAXPRGXXFLTKEIXL 329
           A   ++ P P      P K + G      R   N +GQ     KGA  RG    TK++ L
Sbjct: 62  AATTSSTPQPPPPPPPPEKTHFGDLKDEDRIFTNLYGQHDPFLKGAMKRGDWHRTKDLVL 121

Query: 330 XGXXXXXXXXKXSXLXXXXXXXXXXXXXWSXXXNPSNGRPKXXVVNXXKGXPVXXKNRKX 509
            G        K S L             WS     S+GRP   VVN  +  P   K+R+ 
Sbjct: 122 KGADWIVNEMKKSGLRGRGGAGFPSGLKWSFMPKVSDGRPSYLVVNADESEPGTCKDREI 181

Query: 510 XLHNPXKLVEGXLFAGRPMGAQPXIXLXXXVXXXXNXXXCXLLLLXAXQXXPXXXKTLXG 689
             H+P KL+EG L AG  +G +             N     L             K   G
Sbjct: 182 MRHDPHKLLEGCLIAG--VGMRASAAYIYIRGEYVNERLNLLKAREEAYAAGLLGKNACG 239

Query: 690 PGYXFXNFXXPGVXXLTXXXEGTAPLXSLXGQXXXPXXXTP 812
            GY F      G        E TA L SL G+   P    P
Sbjct: 240 SGYDFDVHIHFGAGAYICGEE-TALLESLEGKQGKPRLKPP 279


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,380,535
Number of Sequences: 37544
Number of extensions: 116693
Number of successful extensions: 134
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 134
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2385713652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)