BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O01 (855 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_40801| Best HMM Match : Complex1_51K (HMM E-Value=0) 61 1e-09 >SB_40801| Best HMM Match : Complex1_51K (HMM E-Value=0) Length = 369 Score = 61.3 bits (142), Expect = 1e-09 Identities = 34/93 (36%), Positives = 43/93 (46%) Frame = +3 Query: 297 GXXFLTKEIXLXGXXXXXXXXKXSXLXXXXXXXXXXXXXWSXXXNPSNGRPKXXVVNXXK 476 G + TKEI L G S L W PS+GRPK VVN + Sbjct: 1 GDWYKTKEIILKGPDWILKEITTSGLRGRGGAGFPTGMKWGFMNKPSDGRPKYLVVNADE 60 Query: 477 GXPVXXKNRKXXLHNPXKLVEGXLFAGRPMGAQ 575 G P K+R+ ++P KL+EG L AG MGA+ Sbjct: 61 GEPGTCKDREIMRNDPHKLIEGCLVAGASMGAR 93 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 11,650,184 Number of Sequences: 59808 Number of extensions: 112296 Number of successful extensions: 45 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 45 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2431332827 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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