BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_O01 (855 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical pr... 81 7e-16 >Z50109-8|CAA90435.1| 479|Caenorhabditis elegans Hypothetical protein C09H10.3 protein. Length = 479 Score = 81.4 bits (192), Expect = 7e-16 Identities = 61/204 (29%), Positives = 77/204 (37%), Gaps = 1/204 (0%) Frame = +3 Query: 204 KNNXGPXAXTXRXXXNXFGQXXWRXKGAXPRGXXFLTKEIXLXGXXXXXXXXKXSXLXXX 383 K + G + R N +G+ +R KGA RG TKEI L G K S L Sbjct: 40 KTSFGNLKDSDRIFTNLYGRHDYRLKGAMARGDWHKTKEIILKGSDWILGELKTSGLRGR 99 Query: 384 XXXXXXXXXXWSXXXNPSNGRPKXXVVNXXKGXPVXXKNRKXXLHNPXKLVEGXLFAGRP 563 W P +GRPK VVN +G P K+R+ H+P KL+EG L G Sbjct: 100 GGAGFPSGMKWGFMNKPFDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCLIGGVA 159 Query: 564 MGAQPXIXLXXXVXXXXNXXXCXLL-LLXAXQXXPXXXKTLXGPGYXFXNFXXPGVXXLT 740 MGA+ + C L + K G GY F F G Sbjct: 160 MGAR---AAYIYIRGEFYNEACILQEAINEAYKAGYLGKDCLGTGYNFDVFVHRGAGAYI 216 Query: 741 XXXEGTAPLXSLXGQXXXPXXXTP 812 E TA + SL G+ P P Sbjct: 217 CGEE-TALIESLEGKQGKPRLKPP 239 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 8,618,003 Number of Sequences: 27780 Number of extensions: 93904 Number of successful extensions: 60 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 60 length of database: 12,740,198 effective HSP length: 81 effective length of database: 10,490,018 effective search space used: 2129473654 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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