Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_O01
         (855 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z50109-8|CAA90435.1|  479|Caenorhabditis elegans Hypothetical pr...    81   7e-16

>Z50109-8|CAA90435.1|  479|Caenorhabditis elegans Hypothetical
           protein C09H10.3 protein.
          Length = 479

 Score = 81.4 bits (192), Expect = 7e-16
 Identities = 61/204 (29%), Positives = 77/204 (37%), Gaps = 1/204 (0%)
 Frame = +3

Query: 204 KNNXGPXAXTXRXXXNXFGQXXWRXKGAXPRGXXFLTKEIXLXGXXXXXXXXKXSXLXXX 383
           K + G    + R   N +G+  +R KGA  RG    TKEI L G        K S L   
Sbjct: 40  KTSFGNLKDSDRIFTNLYGRHDYRLKGAMARGDWHKTKEIILKGSDWILGELKTSGLRGR 99

Query: 384 XXXXXXXXXXWSXXXNPSNGRPKXXVVNXXKGXPVXXKNRKXXLHNPXKLVEGXLFAGRP 563
                     W     P +GRPK  VVN  +G P   K+R+   H+P KL+EG L  G  
Sbjct: 100 GGAGFPSGMKWGFMNKPFDGRPKYLVVNADEGEPGTCKDREIMRHDPHKLIEGCLIGGVA 159

Query: 564 MGAQPXIXLXXXVXXXXNXXXCXLL-LLXAXQXXPXXXKTLXGPGYXFXNFXXPGVXXLT 740
           MGA+        +        C L   +          K   G GY F  F   G     
Sbjct: 160 MGAR---AAYIYIRGEFYNEACILQEAINEAYKAGYLGKDCLGTGYNFDVFVHRGAGAYI 216

Query: 741 XXXEGTAPLXSLXGQXXXPXXXTP 812
              E TA + SL G+   P    P
Sbjct: 217 CGEE-TALIESLEGKQGKPRLKPP 239


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,618,003
Number of Sequences: 27780
Number of extensions: 93904
Number of successful extensions: 60
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)