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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N24
         (917 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch...    43   7e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1...    33   0.043
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual    33   0.075
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||...    33   0.075
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch...    29   0.70 
SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor Raf1|S...    29   0.70 
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc...    29   1.2  
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M...    28   1.6  
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|...    27   2.8  
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1...    26   8.6  

>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 219

 Score = 42.7 bits (96), Expect = 7e-05
 Identities = 20/62 (32%), Positives = 30/62 (48%)
 Frame = +1

Query: 304 LRSTIMREFXXXXXXXXXXXXXAXTVQFVSGCFMEKYDPTIKDXYTKXIXXDXSPCVXXX 483
           +RST +RE+             A T+Q +   F+++YDPTI+D Y K    D    +   
Sbjct: 1   MRSTYLREYKLVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDV 60

Query: 484 LD 489
           LD
Sbjct: 61  LD 62


>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 574

 Score = 33.5 bits (73), Expect = 0.043
 Identities = 24/75 (32%), Positives = 24/75 (32%)
 Frame = +2

Query: 602 TPPXPXPSPXRSGRXXPSXPPXXPXXXRXXXXXXGXAXXPPXPPXXXXPXAXXXARTXTX 781
           TPP P P P       PS PP  P               PP  P      A   A     
Sbjct: 414 TPPVPTP-PSLPPSAPPSLPPSAPPSL--PMGAPAAPPLPPSAPIAPPLPAGMPAAPPLP 470

Query: 782 PAXPXXPPXPAXXXA 826
           PA P  PP PA   A
Sbjct: 471 PAAPAPPPAPAPAPA 485



 Score = 33.1 bits (72), Expect = 0.057
 Identities = 16/57 (28%), Positives = 19/57 (33%)
 Frame = +2

Query: 578 PPAXPXXPTPPXPXPSPXRSGRXXPSXPPXXPXXXRXXXXXXGXAXXPPXPPXXXXP 748
           PP+ P    P  P  +P       P+ PP  P          G    PP PP    P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476



 Score = 32.3 bits (70), Expect = 0.099
 Identities = 26/102 (25%), Positives = 28/102 (27%), Gaps = 3/102 (2%)
 Frame = +2

Query: 566 RGXXPPAXPXXPTPPXPXPSPXRSGRXX---PSXPPXXPXXXRXXXXXXGXAXXPPXPPX 736
           R   PP  P         P P  S R     P+ PP  P          G A     PP 
Sbjct: 358 RSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPV 417

Query: 737 XXXPXAXXXARTXTXPAXPXXPPXPAXXXALAXXPGPXPXTP 862
              P     A     P+ P  P  P    A    P   P  P
Sbjct: 418 PTPPSLPPSAPPSLPPSAP--PSLPMGAPAAPPLPPSAPIAP 457



 Score = 28.7 bits (61), Expect = 1.2
 Identities = 21/89 (23%), Positives = 22/89 (24%), Gaps = 1/89 (1%)
 Frame = +2

Query: 539 AXPXXXAPXRGXXPPAXPXXPTP-PXPXPSPXRSGRXXPSXPPXXPXXXRXXXXXXGXAX 715
           A P   +      P   P    P P P P P       P   P  P              
Sbjct: 229 APPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTS 288

Query: 716 XPPXPPXXXXPXAXXXARTXTXPAXPXXP 802
            PP PP      A   A     P  P  P
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPP 317



 Score = 25.8 bits (54), Expect = 8.6
 Identities = 22/97 (22%), Positives = 26/97 (26%), Gaps = 6/97 (6%)
 Frame = +2

Query: 581 PAXPXXPTPPXPXPSPXRSG------RXXPSXPPXXPXXXRXXXXXXGXAXXPPXPPXXX 742
           PA      PP P PS   S       +  P  PP      R        +     PP   
Sbjct: 282 PAINSTSKPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPP 341

Query: 743 XPXAXXXARTXTXPAXPXXPPXPAXXXALAXXPGPXP 853
            P +         P     PP P    A +    P P
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378


>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1611

 Score = 32.7 bits (71), Expect = 0.075
 Identities = 26/103 (25%), Positives = 26/103 (25%), Gaps = 2/103 (1%)
 Frame = +2

Query: 560  PXRGXXPPAXPXXPTPPXPXPSPXRSGRXXPSXP-PXXPXXXRXXXXXXGXAXXPPXP-P 733
            P     PP       PP P PS        PS   P  P               PP P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136

Query: 734  XXXXPXAXXXARTXTXPAXPXXPPXPAXXXALAXXPGPXPXTP 862
                P           PA    PP P    A    P P    P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP 1179



 Score = 31.1 bits (67), Expect = 0.23
 Identities = 27/110 (24%), Positives = 30/110 (27%), Gaps = 2/110 (1%)
 Frame = +2

Query: 539  AXPXXXAPXRGXXPPAXPXXPTPPXPXPSPXRS-GRXXPSXPPXXPXXXRXXXXXXGXAX 715
            A P    P  G  P   P    PP P PS      +   + PP               A 
Sbjct: 1129 AAPPVPVPS-GAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187

Query: 716  XPPXPPXXXXPXAXXXA-RTXTXPAXPXXPPXPAXXXALAXXPGPXPXTP 862
             PP PP    P     +      P     PP P     L   P P    P
Sbjct: 1188 VPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237



 Score = 30.3 bits (65), Expect = 0.40
 Identities = 25/102 (24%), Positives = 29/102 (28%)
 Frame = +2

Query: 557  APXRGXXPPAXPXXPTPPXPXPSPXRSGRXXPSXPPXXPXXXRXXXXXXGXAXXPPXPPX 736
            AP     P        PP P PS        PS  P  P            +  P  PP 
Sbjct: 1006 APLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPP- 1064

Query: 737  XXXPXAXXXARTXTXPAXPXXPPXPAXXXALAXXPGPXPXTP 862
               P     +   + PA    PP PA    +   P P    P
Sbjct: 1065 ---PVPAPSSEIPSIPAPSGAPPVPA-PSGIPPVPKPSVAAP 1102



 Score = 25.8 bits (54), Expect = 8.6
 Identities = 24/108 (22%), Positives = 25/108 (23%), Gaps = 2/108 (1%)
 Frame = +2

Query: 545  PXXXAPXRGXXPPAXPXXPTPPXPXPSPXRSGRXXPSXPPXXPXXXRXXXXXXGXAXXPP 724
            P    P     P   P    PP P PS            P  P               PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151

Query: 725  XP-PXXXXPXAXXXARTXTXPA-XPXXPPXPAXXXALAXXPGPXPXTP 862
             P P    P           PA     PP P     +   P P    P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199


>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 1461

 Score = 32.7 bits (71), Expect = 0.075
 Identities = 15/39 (38%), Positives = 16/39 (41%)
 Frame = +2

Query: 557 APXRGXXPPAXPXXPTPPXPXPSPXRSGRXXPSXPPXXP 673
           AP     PP  P    PP P P P  +G   P  PP  P
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783


>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 185

 Score = 29.5 bits (63), Expect = 0.70
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +1

Query: 376 TVQFVSGCFMEKYDPTIKDXYTKXI 450
           TVQ+V   F+E Y PTI++ ++K I
Sbjct: 23  TVQYVENHFVESYYPTIENTFSKNI 47


>SPCC613.12c |raf1|dos1, cmc1, clr8|Rik1-associated factor
           Raf1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 638

 Score = 29.5 bits (63), Expect = 0.70
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -3

Query: 150 FHVN*NNSNCIALITLKTNA-EHNFHSTDVINTSLVPHEQQVG 25
           FH + NN  C+AL    T +    F++ D   TSL  H  QVG
Sbjct: 416 FHTS-NNRGCLALFDASTASFVQKFNTADEAFTSLYMHPSQVG 457


>SPAC29B12.07 |sec16||multidomain vesicle coat component
            Sec16|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1995

 Score = 28.7 bits (61), Expect = 1.2
 Identities = 16/51 (31%), Positives = 19/51 (37%)
 Frame = +2

Query: 719  PPXPPXXXXPXAXXXARTXTXPAXPXXPPXPAXXXALAXXPGPXPXTPXXG 871
            PP PP    P A   +   T    P  P  PA   A++  PG     P  G
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGP--PAGATAISGNPGMPAPVPLTG 1930


>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 309

 Score = 28.3 bits (60), Expect = 1.6
 Identities = 22/75 (29%), Positives = 26/75 (34%)
 Frame = +2

Query: 578 PPAXPXXPTPPXPXPSPXRSGRXXPSXPPXXPXXXRXXXXXXGXAXXPPXPPXXXXPXAX 757
           PP+ P  PTP      P  S    PS PP  P            +  PP  P    P A 
Sbjct: 124 PPSAPAPPTPQSEL-RPPTSAPPRPSIPPPSPASAPPI-----PSKAPPI-PSSLPPPAQ 176

Query: 758 XXARTXTXPAXPXXP 802
             A   + P+ P  P
Sbjct: 177 PAAPVKSPPSAPSLP 191



 Score = 26.6 bits (56), Expect = 4.9
 Identities = 29/110 (26%), Positives = 30/110 (27%), Gaps = 1/110 (0%)
 Frame = +2

Query: 545 PXXXAPXRGXXPPAXPXXPTPPXPXPSPXRSGRXXPSXPPXXPXXXRXXXXXXGXAXXPP 724
           P    P     PP     P P  P PSP  S    PS  P  P               PP
Sbjct: 128 PAPPTPQSELRPPTSAP-PRPSIPPPSP-ASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185

Query: 725 XPPXXXXPXAXXXARTXTXPAXPXXPPXPAXXXALAXXPG-PXPXTPXXG 871
             P    P A         P  P  PP P     +A     P    P  G
Sbjct: 186 SAP--SLPSA-------VPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAG 226


>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 743

 Score = 27.5 bits (58), Expect = 2.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 379 QSTHSFRPHPNPTRPL*IRA 320
           Q THS RP PN + PL +R+
Sbjct: 589 QQTHSSRPTPNASSPLDVRS 608


>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
            1|||Manual
          Length = 1841

 Score = 25.8 bits (54), Expect = 8.6
 Identities = 14/51 (27%), Positives = 16/51 (31%)
 Frame = +2

Query: 581  PAXPXXPTPPXPXPSPXRSGRXXPSXPPXXPXXXRXXXXXXGXAXXPPXPP 733
            P     PTPP P P P ++     S P                   PP PP
Sbjct: 899  PTIITHPTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPP 949


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,515,172
Number of Sequences: 5004
Number of extensions: 41734
Number of successful extensions: 156
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 116
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 466510270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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