Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N24
         (917 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            26   1.4  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   3.2  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           25   4.2  
AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   5.6  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    23   9.8  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 26.2 bits (55), Expect = 1.4
 Identities = 10/21 (47%), Positives = 10/21 (47%)
 Frame = +2

Query: 578 PPAXPXXPTPPXPXPSPXRSG 640
           PP  P  P P  P PSP   G
Sbjct: 581 PPPAPPPPPPMGPPPSPLAGG 601


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 3.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 277 CYRNVFTLCAIKCHC 233
           C RN  T+C  KC+C
Sbjct: 803 CKRNGLTICIEKCYC 817


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 24.6 bits (51), Expect = 4.2
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 599  PTPPXPXPSPXRSGR 643
            PTPP P P+P  + R
Sbjct: 1131 PTPPAPPPTPREAAR 1145


>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 5.6
 Identities = 18/54 (33%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
 Frame = -3

Query: 732 GGXGGXXAXPXXXXXXRXXXGXXGGXDGXXRPERXGDGXGX--GGVGXXGXAGG 577
           GG GG                  GG DG   PE  G G G    G+G  G  GG
Sbjct: 517 GGGGGGSGCVNGSRTVGAGGMAGGGSDG---PEYEGAGRGGVGSGIGGGGGGGG 567


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.4 bits (48), Expect = 9.8
 Identities = 11/32 (34%), Positives = 12/32 (37%)
 Frame = +2

Query: 578 PPAXPXXPTPPXPXPSPXRSGRXXPSXPPXXP 673
           PPA P  P      P P    +  PS P   P
Sbjct: 102 PPARPSQPPTTRFAPEPRAEVKFVPSVPLKTP 133


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,214
Number of Sequences: 2352
Number of extensions: 11525
Number of successful extensions: 68
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 68
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 99641691
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)