Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N23
         (954 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00003BFA7C Cluster: PREDICTED: similar to Jagged-1 p...    43   0.013
UniRef50_Q9Y219 Cluster: Jagged-2 precursor; n=25; Amniota|Rep: ...    40   0.12 
UniRef50_P78504 Cluster: Jagged-1 precursor; n=27; Euteleostomi|...    38   0.38 
UniRef50_P18168 Cluster: Serrate protein precursor; n=5; Diptera...    38   0.50 
UniRef50_O00548 Cluster: Delta-like protein 1 precursor; n=33; E...    37   0.87 
UniRef50_Q90Y54 Cluster: Jagged-1b precursor; n=21; Euteleostomi...    36   1.5  
UniRef50_Q4RQ03 Cluster: Chromosome 17 SCAF15006, whole genome s...    34   4.6  
UniRef50_A7RTM0 Cluster: Predicted protein; n=1; Nematostella ve...    34   4.6  
UniRef50_Q5RGG6 Cluster: Novel protein similar to vertebrate del...    33   8.1  
UniRef50_A0V6T5 Cluster: 4'-phosphopantetheinyl transferase; n=1...    33   8.1  
UniRef50_Q95YG0 Cluster: Delta; n=2; Ciona|Rep: Delta - Ciona sa...    33   8.1  

>UniRef50_UPI00003BFA7C Cluster: PREDICTED: similar to Jagged-1
           precursor (Jagged1) (hJ1) (CD339 antigen); n=2;
           Apocrita|Rep: PREDICTED: similar to Jagged-1 precursor
           (Jagged1) (hJ1) (CD339 antigen) - Apis mellifera
          Length = 1331

 Score = 42.7 bits (96), Expect = 0.013
 Identities = 22/48 (45%), Positives = 28/48 (58%)
 Frame = +2

Query: 386 EYQSAAAPGGSCSFGRAASPVLGTDSFXLAEPLLXPSXLXXSXFRWTR 529
           EYQS     GSCSFG  +S  LG ++F L+EP+   +      FRWTR
Sbjct: 201 EYQSNVTAIGSCSFGNVSSHALGQNTFTLSEPV---TLQLHFTFRWTR 245


>UniRef50_Q9Y219 Cluster: Jagged-2 precursor; n=25; Amniota|Rep:
           Jagged-2 precursor - Homo sapiens (Human)
          Length = 1238

 Score = 39.5 bits (88), Expect = 0.12
 Identities = 17/35 (48%), Positives = 22/35 (62%)
 Frame = +2

Query: 368 LRSASXEYQSAAAPGGSCSFGRAASPVLGTDSFXL 472
           +R    EYQ+   P G CS+G  A+PVLG +SF L
Sbjct: 71  VRVCLKEYQAKVTPTGPCSYGHGATPVLGGNSFYL 105


>UniRef50_P78504 Cluster: Jagged-1 precursor; n=27;
           Euteleostomi|Rep: Jagged-1 precursor - Homo sapiens
           (Human)
          Length = 1218

 Score = 37.9 bits (84), Expect = 0.38
 Identities = 15/29 (51%), Positives = 20/29 (68%)
 Frame = +2

Query: 386 EYQSAAAPGGSCSFGRAASPVLGTDSFXL 472
           EYQS    GG CSFG  ++PV+G ++F L
Sbjct: 81  EYQSRVTAGGPCSFGSGSTPVIGGNTFNL 109


>UniRef50_P18168 Cluster: Serrate protein precursor; n=5;
           Diptera|Rep: Serrate protein precursor - Drosophila
           melanogaster (Fruit fly)
          Length = 1404

 Score = 37.5 bits (83), Expect = 0.50
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
 Frame = +2

Query: 233 AGVFXLQILEFSNYRLEVXXXXXXXXXXXXXXXXXXXSPSLPNQGLRSASXEYQSA---A 403
           AG F L+ILE SN    +                     S      R    EYQ+    A
Sbjct: 80  AGNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGC-SPCTTAFRLCLKEYQTTEQGA 138

Query: 404 APGGSCSFGRAASPVLGTDSFXLAEPLLXPSXLXXSXFRWTR 529
           +    CSFG A + +LG  SF L++P +    L  + FRWT+
Sbjct: 139 SISTGCSFGNATTKILGGSSFVLSDPGVGAIVLPFT-FRWTK 179


>UniRef50_O00548 Cluster: Delta-like protein 1 precursor; n=33;
           Euteleostomi|Rep: Delta-like protein 1 precursor - Homo
           sapiens (Human)
          Length = 723

 Score = 36.7 bits (81), Expect = 0.87
 Identities = 14/30 (46%), Positives = 21/30 (70%)
 Frame = +2

Query: 389 YQSAAAPGGSCSFGRAASPVLGTDSFXLAE 478
           YQ++ +P   C++G A +PVLG DSF L +
Sbjct: 67  YQASVSPEPPCTYGSAVTPVLGVDSFSLPD 96


>UniRef50_Q90Y54 Cluster: Jagged-1b precursor; n=21;
           Euteleostomi|Rep: Jagged-1b precursor - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 1213

 Score = 35.9 bits (79), Expect = 1.5
 Identities = 14/27 (51%), Positives = 19/27 (70%)
 Frame = +2

Query: 386 EYQSAAAPGGSCSFGRAASPVLGTDSF 466
           EYQS  +  G+CSFG  ++PVLG + F
Sbjct: 78  EYQSRVSSAGACSFGTGSTPVLGGNKF 104


>UniRef50_Q4RQ03 Cluster: Chromosome 17 SCAF15006, whole genome
           shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
           Chromosome 17 SCAF15006, whole genome shotgun sequence -
           Tetraodon nigroviridis (Green puffer)
          Length = 1364

 Score = 34.3 bits (75), Expect = 4.6
 Identities = 14/29 (48%), Positives = 19/29 (65%)
 Frame = +2

Query: 386 EYQSAAAPGGSCSFGRAASPVLGTDSFXL 472
           EYQS     G CS+G  ++PVLG ++F L
Sbjct: 73  EYQSRVHAAGPCSYGMGSTPVLGGNTFSL 101


>UniRef50_A7RTM0 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 1520

 Score = 34.3 bits (75), Expect = 4.6
 Identities = 19/51 (37%), Positives = 23/51 (45%)
 Frame = -1

Query: 540 TGTXRVHRKXEXXSXEGXRRGSARXKESVPRTGEAARPKEQLPPGAAADWY 388
           T T   HR  E  S E  RR       S PRT    R +++ P GAA  +Y
Sbjct: 473 TPTGEGHRAEEARSAERGRRREGERGSSGPRTPSPDRGRQRTPEGAAGRYY 523


>UniRef50_Q5RGG6 Cluster: Novel protein similar to vertebrate
           delta-like 4; n=1; Danio rerio|Rep: Novel protein
           similar to vertebrate delta-like 4 - Danio rerio
           (Zebrafish) (Brachydanio rerio)
          Length = 645

 Score = 33.5 bits (73), Expect = 8.1
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +2

Query: 389 YQSAAAPGGSCSFGRAASPVLGTDSFXL 472
           YQ   +PG  C FG A +PVLGT+SF +
Sbjct: 42  YQVVVSPG-DCIFGSALTPVLGTNSFRI 68


>UniRef50_A0V6T5 Cluster: 4'-phosphopantetheinyl transferase; n=1;
           Delftia acidovorans SPH-1|Rep: 4'-phosphopantetheinyl
           transferase - Delftia acidovorans SPH-1
          Length = 342

 Score = 33.5 bits (73), Expect = 8.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 4   WSLTRESAADARAAPSCPVRACQCVC 81
           W     + A ARA+  CP+RAC+C C
Sbjct: 25  WMCWAPTTASARASAMCPLRACRCRC 50


>UniRef50_Q95YG0 Cluster: Delta; n=2; Ciona|Rep: Delta - Ciona
           savignyi (Pacific transparent sea squirt)
          Length = 721

 Score = 33.5 bits (73), Expect = 8.1
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
 Frame = +2

Query: 347 PSLPN------QGLRSASXEYQSAAAPGGSCSFGRAASPVLGTDSF 466
           PS PN        +R     +Q+   P G C+FG   SPV+G +SF
Sbjct: 49  PSFPNCIEQCRTSIRVCLKHFQATVDPSGPCTFGSYKSPVIGGNSF 94


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,844,904
Number of Sequences: 1657284
Number of extensions: 6243581
Number of successful extensions: 18211
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18171
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 88182286632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)