Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N23
         (954 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_1014 - 33810112-33811995                                         29   4.1  
08_02_1616 + 28260204-28262555                                         29   7.2  
12_02_1069 + 25801309-25801433,25802429-25802620,25803130-258031...    28   9.5  

>01_06_1014 - 33810112-33811995
          Length = 627

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -1

Query: 465 KESVPRTGEAARPKEQLPPGAAADWYSLEAERK 367
           K SVP    A+ P + LP   + +W  LE ERK
Sbjct: 117 KPSVPPLLPASSPAKLLPANVSEEWRRLEIERK 149


>08_02_1616 + 28260204-28262555
          Length = 783

 Score = 28.7 bits (61), Expect = 7.2
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 140 ARSLRAARMSRTHDTPGPSAHTHWH 66
           AR L+  R+S +H  PGPS+ T  H
Sbjct: 757 ARMLQLQRLSHSHVAPGPSSSTTTH 781


>12_02_1069 +
           25801309-25801433,25802429-25802620,25803130-25803159,
           25803426-25803500,25803599-25804373,25804549-25804614,
           25804746-25804811,25804898-25805140,25805407-25805502
          Length = 555

 Score = 28.3 bits (60), Expect = 9.5
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +1

Query: 13  TRESAADARAAPSCPVRACQCVCA 84
           T  +A+ A +A SCPV+  QC C+
Sbjct: 47  TPSAASAAASASSCPVKKTQCPCS 70


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,997,652
Number of Sequences: 37544
Number of extensions: 215558
Number of successful extensions: 669
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 655
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2752963900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)