BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_N23 (954 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 01_06_1014 - 33810112-33811995 29 4.1 08_02_1616 + 28260204-28262555 29 7.2 12_02_1069 + 25801309-25801433,25802429-25802620,25803130-258031... 28 9.5 >01_06_1014 - 33810112-33811995 Length = 627 Score = 29.5 bits (63), Expect = 4.1 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -1 Query: 465 KESVPRTGEAARPKEQLPPGAAADWYSLEAERK 367 K SVP A+ P + LP + +W LE ERK Sbjct: 117 KPSVPPLLPASSPAKLLPANVSEEWRRLEIERK 149 >08_02_1616 + 28260204-28262555 Length = 783 Score = 28.7 bits (61), Expect = 7.2 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -2 Query: 140 ARSLRAARMSRTHDTPGPSAHTHWH 66 AR L+ R+S +H PGPS+ T H Sbjct: 757 ARMLQLQRLSHSHVAPGPSSSTTTH 781 >12_02_1069 + 25801309-25801433,25802429-25802620,25803130-25803159, 25803426-25803500,25803599-25804373,25804549-25804614, 25804746-25804811,25804898-25805140,25805407-25805502 Length = 555 Score = 28.3 bits (60), Expect = 9.5 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +1 Query: 13 TRESAADARAAPSCPVRACQCVCA 84 T +A+ A +A SCPV+ QC C+ Sbjct: 47 TPSAASAAASASSCPVKKTQCPCS 70 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,997,652 Number of Sequences: 37544 Number of extensions: 215558 Number of successful extensions: 669 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 655 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 669 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2752963900 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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