Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N23
         (954 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protei...    38   0.027
M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein ( D.me...    38   0.027
AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA...    38   0.027
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro...    29   7.1  
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P...    29   7.1  

>X56811-1|CAA40148.1| 1408|Drosophila melanogaster Serrate protein
           protein.
          Length = 1408

 Score = 37.5 bits (83), Expect = 0.027
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
 Frame = +2

Query: 233 AGVFXLQILEFSNYRLEVXXXXXXXXXXXXXXXXXXXSPSLPNQGLRSASXEYQSA---A 403
           AG F L+ILE SN    +                     S      R    EYQ+    A
Sbjct: 84  AGNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGC-SPCTTAFRLCLKEYQTTEQGA 142

Query: 404 APGGSCSFGRAASPVLGTDSFXLAEPLLXPSXLXXSXFRWTR 529
           +    CSFG A + +LG  SF L++P +    L  + FRWT+
Sbjct: 143 SISTGCSFGNATTKILGGSSFVLSDPGVGAIVLPFT-FRWTK 183


>M35759-1|AAA28938.1| 1404|Drosophila melanogaster protein (
           D.melanogaster serrate(Ser) mRNA, complete cds. ).
          Length = 1404

 Score = 37.5 bits (83), Expect = 0.027
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
 Frame = +2

Query: 233 AGVFXLQILEFSNYRLEVXXXXXXXXXXXXXXXXXXXSPSLPNQGLRSASXEYQSA---A 403
           AG F L+ILE SN    +                     S      R    EYQ+    A
Sbjct: 80  AGNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGC-SPCTTAFRLCLKEYQTTEQGA 138

Query: 404 APGGSCSFGRAASPVLGTDSFXLAEPLLXPSXLXXSXFRWTR 529
           +    CSFG A + +LG  SF L++P +    L  + FRWT+
Sbjct: 139 SISTGCSFGNATTKILGGSSFVLSDPGVGAIVLPFT-FRWTK 179


>AE014297-4084|AAF56678.2| 1407|Drosophila melanogaster CG6127-PA
           protein.
          Length = 1407

 Score = 37.5 bits (83), Expect = 0.027
 Identities = 31/102 (30%), Positives = 42/102 (41%), Gaps = 3/102 (2%)
 Frame = +2

Query: 233 AGVFXLQILEFSNYRLEVXXXXXXXXXXXXXXXXXXXSPSLPNQGLRSASXEYQSA---A 403
           AG F L+ILE SN    +                     S      R    EYQ+    A
Sbjct: 83  AGNFELEILEISNTNSHLLNGYCCGMPAELRATKTIGC-SPCTTAFRLCLKEYQTTEQGA 141

Query: 404 APGGSCSFGRAASPVLGTDSFXLAEPLLXPSXLXXSXFRWTR 529
           +    CSFG A + +LG  SF L++P +    L  + FRWT+
Sbjct: 142 SISTGCSFGNATTKILGGSSFVLSDPGVGAIVLPFT-FRWTK 182


>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p
           protein.
          Length = 2201

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -1

Query: 561 HTAXAXSTGTXRVH--RKXEXXSXEGXRRGSARXKESVPRTGEAARPKEQLPPGAAADWY 388
           HT    +T T  +   +K            SA  K+     G+AA  KE  P G++A+  
Sbjct: 231 HTTSTSTTSTTSITSVKKQAKRKIATPMPSSAGRKKKTVGKGKAAAAKEPPPSGSSAESS 290

Query: 387 SLEAERK 367
           S E ERK
Sbjct: 291 SSEDERK 297


>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
           isoform A protein.
          Length = 2529

 Score = 29.5 bits (63), Expect = 7.1
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
 Frame = -1

Query: 561 HTAXAXSTGTXRVH--RKXEXXSXEGXRRGSARXKESVPRTGEAARPKEQLPPGAAADWY 388
           HT    +T T  +   +K            SA  K+     G+AA  KE  P G++A+  
Sbjct: 559 HTTSTSTTSTTSITSVKKQAKRKIATPMPSSAGRKKKTVGKGKAAAAKEPPPSGSSAESS 618

Query: 387 SLEAERK 367
           S E ERK
Sbjct: 619 SSEDERK 625


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,570,170
Number of Sequences: 53049
Number of extensions: 333673
Number of successful extensions: 1126
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4751175096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)