BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_N21 (874 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 23 4.9 AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 22 6.4 AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. 22 6.4 AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 22 8.5 AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 22 8.5 AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 22 8.5 AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 22 8.5 >AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.6 bits (46), Expect = 4.9 Identities = 15/49 (30%), Positives = 20/49 (40%) Frame = +1 Query: 412 G*RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSYHGSRVTSMTLKDK 558 G R F R S H YE+ + S++N E S R KD+ Sbjct: 218 GSRSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266 >AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 22.2 bits (45), Expect = 6.4 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = +1 Query: 418 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSYHGSRVTSMTLKDK 558 R F R S H YE+ + S++N E S R KD+ Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDGNSYRNDGERSCSRDRSREYKKKDR 266 >AY268030-1|AAP23055.1| 602|Apis mellifera dorsal protein protein. Length = 602 Score = 22.2 bits (45), Expect = 6.4 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +3 Query: 549 QRQATKDAGTISGLNVLRIINEPTAAAIAYG 641 Q +A K A + N II+EPT YG Sbjct: 353 QAEAEKHAAMLYQYNFNIIISEPTERISPYG 383 >AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.8 bits (44), Expect = 8.5 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = +1 Query: 418 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSYHGSRVTSMTLKDK 558 R F R S H YE+ + S++N E S R KD+ Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266 >AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.8 bits (44), Expect = 8.5 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = +1 Query: 418 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSYHGSRVTSMTLKDK 558 R F R S H YE+ + S++N E S R KD+ Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266 >AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. Length = 401 Score = 21.8 bits (44), Expect = 8.5 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = +1 Query: 418 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSYHGSRVTSMTLKDK 558 R F R S H YE+ + S++N E S R KD+ Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266 >AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex determiner protein. Length = 401 Score = 21.8 bits (44), Expect = 8.5 Identities = 14/47 (29%), Positives = 19/47 (40%) Frame = +1 Query: 418 RQNLFPRGSQFHGAYENEGNCRSLSWQNCAECSYHGSRVTSMTLKDK 558 R F R S H YE+ + S++N E S R KD+ Sbjct: 220 RSRSFQRTSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKKDR 266 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 218,793 Number of Sequences: 438 Number of extensions: 4711 Number of successful extensions: 13 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 13 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 13 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 28280841 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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