BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_N19 (857 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 24 1.3 AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 24 1.3 EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 3.1 U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. 21 9.4 U81038-1|AAB39355.1| 412|Tribolium castaneum transcription fact... 21 9.4 AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. 21 9.4 AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcrip... 21 9.4 >AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. Length = 790 Score = 24.2 bits (50), Expect = 1.3 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = -1 Query: 254 NRHKAMRKHKCENEIKIKNY 195 N ++ +RK+ C+NE + KN+ Sbjct: 326 NHNEQLRKYLCKNEDETKNH 345 >AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. Length = 682 Score = 24.2 bits (50), Expect = 1.3 Identities = 8/20 (40%), Positives = 15/20 (75%) Frame = -1 Query: 254 NRHKAMRKHKCENEIKIKNY 195 N ++ +RK+ C+NE + KN+ Sbjct: 218 NHNEQLRKYLCKNEDETKNH 237 >EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 protein. Length = 535 Score = 23.0 bits (47), Expect = 3.1 Identities = 10/25 (40%), Positives = 12/25 (48%) Frame = +2 Query: 404 WYRSSRTSLLTYWIFLLQMLESARR 478 W+ S + W FLLQ LE R Sbjct: 54 WFAGSSNVGINKWRFLLQCLEDLDR 78 >U81040-1|AAB39356.1| 283|Tribolium castaneum TC Deformed protein. Length = 283 Score = 21.4 bits (43), Expect = 9.4 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%) Frame = +2 Query: 533 RFGFPNPVNYNDNELFCG-GY 592 ++G+ N NYN N L G GY Sbjct: 61 QYGYHNHQNYNSNVLSNGYGY 81 >U81038-1|AAB39355.1| 412|Tribolium castaneum transcription factor Deformed protein. Length = 412 Score = 21.4 bits (43), Expect = 9.4 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%) Frame = +2 Query: 533 RFGFPNPVNYNDNELFCG-GY 592 ++G+ N NYN N L G GY Sbjct: 61 QYGYHNHQNYNSNVLSNGYGY 81 >AF321227-3|AAK16423.1| 412|Tribolium castaneum Dfd protein. Length = 412 Score = 21.4 bits (43), Expect = 9.4 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%) Frame = +2 Query: 533 RFGFPNPVNYNDNELFCG-GY 592 ++G+ N NYN N L G GY Sbjct: 61 QYGYHNHQNYNSNVLSNGYGY 81 >AF243042-1|AAF68438.1| 126|Tribolium castaneum mutant transcription factor TcDfd1 protein. Length = 126 Score = 21.4 bits (43), Expect = 9.4 Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%) Frame = +2 Query: 533 RFGFPNPVNYNDNELFCG-GY 592 ++G+ N NYN N L G GY Sbjct: 61 QYGYHNHQNYNSNVLSNGYGY 81 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 177,165 Number of Sequences: 336 Number of extensions: 3852 Number of successful extensions: 12 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 8 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 122,585 effective HSP length: 56 effective length of database: 103,769 effective search space used: 23763101 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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