BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_N19 (857 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7) 67 1e-11 SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05) 64 1e-10 SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) 63 2e-10 SB_28578| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 4e-10 SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012) 60 2e-09 SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1 SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) 30 2.8 SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) 28 8.5 >SB_6097| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.7) Length = 325 Score = 67.3 bits (157), Expect = 1e-11 Identities = 33/75 (44%), Positives = 40/75 (53%), Gaps = 2/75 (2%) Frame = +2 Query: 488 GHGRLMDPPARNSMWRFGFPNPV--NYNDNELFCGGYAVQWEQNEGKCGXCGDAAHLTEP 661 GHG L PPARN P N+ NEL CGG+ QW + GKCG CGD T+ Sbjct: 19 GHGYLSIPPARNYCGALKDKGPCVRNWTPNELNCGGFVYQWREAGGKCGVCGDPYGKTQ- 77 Query: 662 RXHEAGGMYGKGIVT 706 H GG + KG++T Sbjct: 78 -RHTEGGEFAKGVIT 91 >SB_20442| Best HMM Match : Chitin_bind_3 (HMM E-Value=7.4e-05) Length = 288 Score = 64.5 bits (150), Expect = 1e-10 Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 1/89 (1%) Frame = +2 Query: 443 IFLLQMLESARRGAEGHGRLMDPPARNSMWRFGFPN-PVNYNDNELFCGGYAVQWEQNEG 619 +F L ++ S A GHG + +P ARN ++GF P Y +E CGG QW++N G Sbjct: 3 LFSLLLIASLTALALGHGYIKNPAARNVCRKYGFDKCPREYTPDEKNCGGIGTQWDKNGG 62 Query: 620 KCGXCGDAAHLTEPRXHEAGGMYGKGIVT 706 KCG CGD +P G + G +T Sbjct: 63 KCGVCGDRYDNPKPTL-VYPGKFATGTIT 90 >SB_6096| Best HMM Match : Chitin_bind_3 (HMM E-Value=1.9e-06) Length = 295 Score = 63.3 bits (147), Expect = 2e-10 Identities = 38/90 (42%), Positives = 47/90 (52%), Gaps = 2/90 (2%) Frame = +2 Query: 443 IFLLQMLESARRGAEGHGRLMDPPARNSMWRFGFPNPV--NYNDNELFCGGYAVQWEQNE 616 I L +L +A GHG +++P ARN+ + FPN NYN NE FCGG A Q N Sbjct: 6 ILALSLLCNAVLLVHGHGYMIEPAARNACY-MKFPNQCVRNYNANEQFCGGRATQ-IANG 63 Query: 617 GKCGXCGDAAHLTEPRXHEAGGMYGKGIVT 706 KCG CGD+ P H G Y G +T Sbjct: 64 NKCGVCGDSYSNPSP-PHVYPGKYATGFIT 92 >SB_28578| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 103 Score = 62.5 bits (145), Expect = 4e-10 Identities = 31/75 (41%), Positives = 46/75 (61%), Gaps = 2/75 (2%) Frame = +2 Query: 488 GHGRLMDPPARNSMWRFGFPN--PVNYNDNELFCGGYAVQWEQNEGKCGXCGDAAHLTEP 661 GHG + +P AR +R FP V++ +EL CGG++ Q ++N GKCG CGDA HLT+ Sbjct: 19 GHGFIQEPAARQVCYR-EFPKCTSVHWTPDELNCGGFSTQNDKNGGKCGVCGDAYHLTD- 76 Query: 662 RXHEAGGMYGKGIVT 706 + G + G++T Sbjct: 77 KAFVYPGKFALGVIT 91 >SB_28577| Best HMM Match : Chitin_bind_3 (HMM E-Value=0.00012) Length = 281 Score = 60.5 bits (140), Expect = 2e-09 Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%) Frame = +2 Query: 443 IFLLQMLESARRGAEGHGRLMDPPARNSMWRFGFPNPV-NYNDNELFCGGYAVQWEQNEG 619 +F L ++ S A GHG + +P ARN+ ++GF + + +E CGG + QW+ N G Sbjct: 3 LFSLLLIASLTALALGHGYIRNPAARNACKQYGFEECIIEWTMDEKNCGGLSAQWKDNGG 62 Query: 620 KCGXCGDAAHLTEPRXHEAGGMYGKGIVT 706 KCG CGD +P G + G +T Sbjct: 63 KCGVCGDRYDNPKPTL-VYPGKFATGTIT 90 >SB_30234| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 5222 Score = 30.3 bits (65), Expect = 2.1 Identities = 16/36 (44%), Positives = 21/36 (58%), Gaps = 2/36 (5%) Frame = +3 Query: 387 PEWRCDGTGLVGP--HC*PIGYFCCKCWKARVAEPK 488 P W C+G G P C P GY+C + +A V+EPK Sbjct: 2688 PGWYCEGFGNSKPTDKCAP-GYYCPENSQASVSEPK 2722 >SB_11042| Best HMM Match : zf-C3HC4 (HMM E-Value=0.00013) Length = 499 Score = 29.9 bits (64), Expect = 2.8 Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 1/41 (2%) Frame = +2 Query: 539 GFPN-PVNYNDNELFCGGYAVQWEQNEGKCGXCGDAAHLTE 658 G P+ PV +++FC G W +N G C C +++ Sbjct: 337 GVPSTPVVTQCDQIFCSGCITAWLRNAGACSSCRSVLEVSD 377 >SB_11257| Best HMM Match : GCC2_GCC3 (HMM E-Value=2.7e-11) Length = 3810 Score = 28.3 bits (60), Expect = 8.5 Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 2/22 (9%) Frame = +3 Query: 393 WRCDGTGLVGP--HC*PIGYFC 452 W CD TGLV P C P G+FC Sbjct: 2403 WYCDSTGLVQPKDECDP-GFFC 2423 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 23,601,086 Number of Sequences: 59808 Number of extensions: 501777 Number of successful extensions: 935 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 867 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 930 length of database: 16,821,457 effective HSP length: 81 effective length of database: 11,977,009 effective search space used: 2443309836 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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