Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N19
         (857 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    29   0.18 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    27   0.55 
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    25   2.9  

>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 29.1 bits (62), Expect = 0.18
 Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
 Frame = +3

Query: 234 SHSFVPVIFHLNFVVVSSTGAFCPVFFSAITRQRNFGSLDFHWSRGKNIVE------PEW 395
           +H+ +P  F+   V++ S  A+ P  F   +   +  ++DF +  G+  V       P W
Sbjct: 74  THTQLPPQFYAQNVMMGSWRAYDPTGFQRTSPYDS--AMDFQFGEGRECVNCGAISTPLW 131

Query: 396 RCDGTG 413
           R DGTG
Sbjct: 132 RRDGTG 137


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 27.5 bits (58), Expect = 0.55
 Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +2

Query: 581 CG--GYAVQWEQNEGKCGXCGDAAHL 652
           CG  G+  +  QNE KC  CG A H+
Sbjct: 534 CGLTGHKARSCQNEAKCALCGGAHHI 559


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -2

Query: 421 PTRPVPSHLHSGSTIFFPLDQ*KSNEPKFLCLVMALK 311
           PT   P     G+ I + +D    N P +LC++MAL+
Sbjct: 12  PTESKPEGKARGADINYGIDD---NPPWYLCIMMALQ 45


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 800,372
Number of Sequences: 2352
Number of extensions: 16897
Number of successful extensions: 34
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 91372671
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)