BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_N19 (857 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 2.1 DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 23 4.8 DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. 23 4.8 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 6.3 AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective... 22 8.3 >AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methyltransferase protein. Length = 683 Score = 23.8 bits (49), Expect = 2.1 Identities = 11/32 (34%), Positives = 19/32 (59%) Frame = +1 Query: 4 QILASAAVQPLPKSFLKYKNIQFRYISTGTPL 99 QILA ++ +P +K+KN +Y +T P+ Sbjct: 248 QILAKKEIKGVPTYLIKWKNWDLKY-NTWEPI 278 Score = 23.0 bits (47), Expect = 3.6 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%) Frame = +2 Query: 503 MDPPARNSMW--RFGFPNPVNYNDNELF 580 + PP ++ +F FP NYNDN + Sbjct: 117 VQPPTKHQKLDQKFIFPQENNYNDNYFY 144 >DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex determiner protein. Length = 189 Score = 22.6 bits (46), Expect = 4.8 Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 4/34 (11%) Frame = +2 Query: 521 NSMWRFGFPNPVNYNDN----ELFCGGYAVQWEQ 610 N+ +++ + N NYN+N +L+ Y + EQ Sbjct: 93 NNNYKYNYNNKYNYNNNNYNKKLYYKNYIINIEQ 126 >DQ288392-1|ABC41342.1| 120|Apis mellifera nanos protein. Length = 120 Score = 22.6 bits (46), Expect = 4.8 Identities = 7/9 (77%), Positives = 7/9 (77%) Frame = +2 Query: 623 CGXCGDAAH 649 CG CGD AH Sbjct: 78 CGACGDIAH 86 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 22.2 bits (45), Expect = 6.3 Identities = 9/21 (42%), Positives = 11/21 (52%) Frame = +2 Query: 404 WYRSSRTSLLTYWIFLLQMLE 466 W+ S + W FLLQ LE Sbjct: 58 WFAGSTNIGINKWRFLLQCLE 78 >AB238796-1|BAE93398.1| 128|Apis mellifera Queen brain-selective protein-1 protein. Length = 128 Score = 21.8 bits (44), Expect = 8.3 Identities = 8/23 (34%), Positives = 10/23 (43%) Frame = +2 Query: 581 CGGYAVQWEQNEGKCGXCGDAAH 649 C GY + C CGD+ H Sbjct: 22 CSGYPSIRQGTTSYCLGCGDSCH 44 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 223,759 Number of Sequences: 438 Number of extensions: 5591 Number of successful extensions: 8 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 7 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 8 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 27673956 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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