Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N18
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   4.1  
AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    22   5.4  
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    22   5.4  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    22   7.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.4  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +1

Query: 631 MFPICYGSENEKVPCPS 681
           M+ +C G     +PCPS
Sbjct: 933 MYYMCEGERKHHMPCPS 949


>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 575 SRTLSKAACTSPGSGSPNCMLRILSVLVR 489
           S T+S +  +SPG+GS N   +I + + R
Sbjct: 88  SPTVSGSEMSSPGAGSGNLSPQIQTQVAR 116


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -3

Query: 575 SRTLSKAACTSPGSGSPNCMLRILSVLVR 489
           S T+S +  +SPG+GS N   +I + + R
Sbjct: 88  SPTVSGSEMSSPGAGSGNLSPQIQTQVAR 116


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +2

Query: 548 YRRLLTMSLNILTILIQQMTSIR 616
           Y  LLT + ++L ILIQ   S+R
Sbjct: 287 YIVLLTFASDLLFILIQLFNSLR 309


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 624  VCYVSNMLWKRK 659
            VCY +N  W RK
Sbjct: 1401 VCYFTNWAWYRK 1412



 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 624  VCYVSNMLWKRK*EG 668
            VCY +N  W R+ +G
Sbjct: 2324 VCYFTNWAWYRQGDG 2338


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,822
Number of Sequences: 336
Number of extensions: 3629
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)