Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N18
         (853 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    27   0.55 
CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase ...    25   2.9  

>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 27.5 bits (58), Expect = 0.55
 Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
 Frame = +1

Query: 295 YQISRGSQETCKDFYGL-QWKPQKLKMHQGNSELGPIDDERRKFLEDALKSLTVNIAEVL 471
           Y+  R  +E C     L + K ++L   QG        +ER K+++  LKSL   I + +
Sbjct: 351 YEAMRRKEEECSRELNLKEQKRKELYAKQGRGSQFSSKEERDKWIQGELKSLNKQIKDKI 410

Query: 472 LNAIRILTNTERIRSIQFGEPLPGDVQAAFDNVLEYIDDIDTAN-DFYKM 618
            +  ++  + ++  + Q GE L   +Q   ++  +    ID  N +FY++
Sbjct: 411 SHQNKLQDDLKKDIAKQ-GE-LEKKIQEHTESFEQLRVQIDEHNKNFYEL 458


>CR954257-9|CAJ14160.1|  573|Anopheles gambiae putative esterase
           protein.
          Length = 573

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 18/56 (32%), Positives = 24/56 (42%)
 Frame = -1

Query: 748 RTXRTSPGRTDCSDRAQXRTVLARGTGPSHFRFHSILET*QTLPSYRSHLLYQYRQ 581
           +T   +PG+       Q  TV A GTG      H +L   QT    R +L Y  +Q
Sbjct: 510 KTGNPTPGQDALLQNVQWPTVGATGTGYLSIG-HDLLPVQQTPNPTRMNLWYNLQQ 564


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 788,179
Number of Sequences: 2352
Number of extensions: 14329
Number of successful extensions: 19
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)