Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N18
         (853 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021487-5|CAA16350.1|  244|Caenorhabditis elegans Hypothetical ...    32   0.60 
AL021487-4|CAA16351.1|  244|Caenorhabditis elegans Hypothetical ...    32   0.60 
AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical ...    31   0.79 
Z81102-2|CAB03203.1|  313|Caenorhabditis elegans Hypothetical pr...    30   2.4  
U29488-10|AAK93843.1|  813|Caenorhabditis elegans Dnaj domain (p...    28   7.3  

>AL021487-5|CAA16350.1|  244|Caenorhabditis elegans Hypothetical
           protein Y45F10B.9 protein.
          Length = 244

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
 Frame = +1

Query: 406 DERRKFLEDALKSLTVNIA---EVLLNAIR-ILTNTERIRSIQFGEPLPGDVQAAFDNVL 573
           +ER K L++ L  L   I+   E L+ ++  +L   E++++I+    +  D ++AFD  L
Sbjct: 96  NERIKILDEELDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERSAFDQEL 155

Query: 574 EYIDDIDTANDFYKMGGFAMFPICYGSENEKVPCPSPVRSWXELC 708
             +      N+   +       ICY S + +   P  ++    +C
Sbjct: 156 TRLKTSRLENEKSSLASRVECTICYLSYDNEARVPRVMKCGHTIC 200


>AL021487-4|CAA16351.1|  244|Caenorhabditis elegans Hypothetical
           protein Y45F10B.8 protein.
          Length = 244

 Score = 31.9 bits (69), Expect = 0.60
 Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
 Frame = +1

Query: 406 DERRKFLEDALKSLTVNIA---EVLLNAIR-ILTNTERIRSIQFGEPLPGDVQAAFDNVL 573
           +ER K L++ L  L   I+   E L+ ++  +L   E++++I+    +  D ++AFD  L
Sbjct: 96  NERIKILDEKLDKLEAKISKTEESLVQSVSMLLEKDEQLKTIRKEMKIMDDERSAFDQEL 155

Query: 574 EYIDDIDTANDFYKMGGFAMFPICYGSENEKVPCPSPVRSWXELC 708
             +      N+   +       ICY S + +   P  ++    +C
Sbjct: 156 TRLKTSRLENEKSSLASRVECTICYLSYDNEARVPRVMKCGHTIC 200


>AL132951-2|CAC44305.1|  561|Caenorhabditis elegans Hypothetical
           protein Y67H2A.4a protein.
          Length = 561

 Score = 31.5 bits (68), Expect = 0.79
 Identities = 18/55 (32%), Positives = 28/55 (50%)
 Frame = +1

Query: 469 LLNAIRILTNTERIRSIQFGEPLPGDVQAAFDNVLEYIDDIDTANDFYKMGGFAM 633
           +L  ++     E ++ I FGE        AF   L +IDD+D A  F+KM G ++
Sbjct: 428 MLKRVKRRFKGENLKGISFGET------KAFFEFLYHIDDVDIALHFHKMAGMSI 476


>Z81102-2|CAB03203.1|  313|Caenorhabditis elegans Hypothetical
           protein M02B1.4 protein.
          Length = 313

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/48 (27%), Positives = 24/48 (50%)
 Frame = +2

Query: 461 LKCY*TPSEFSPILKGFVAYSLGNHYQETYRRLLTMSLNILTILIQQM 604
           L  Y  P+ F P+L G  A+ +GN +    + L+ +S+    ++   M
Sbjct: 176 LSDYGAPNYFMPVLVGLTAHLIGNRFDNNRKALVGLSVGSAVLVSLSM 223


>U29488-10|AAK93843.1|  813|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 8 protein.
          Length = 813

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +1

Query: 559 FDNVLEYIDDIDTANDFYKMGGFAMF 636
           FD+V ++ D+ + A  FY  GGF  F
Sbjct: 88  FDDVKQFEDNAERARSFYGFGGFGGF 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,643,085
Number of Sequences: 27780
Number of extensions: 341752
Number of successful extensions: 870
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)