Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_N17
(848 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical pr... 76 3e-14
Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical pr... 51 9e-07
AF068718-4|AAC17765.1| 98|Caenorhabditis elegans Hypothetical ... 35 0.064
Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical p... 29 3.2
Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical p... 29 3.2
U41022-1|AAA82338.3| 303|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical... 29 3.2
Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical p... 29 4.2
U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical pr... 29 4.2
AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical ... 29 4.2
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 29 5.5
Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical pr... 28 7.3
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 28 9.6
>Z80223-7|CAB02316.2| 613|Caenorhabditis elegans Hypothetical
protein F26D10.9a protein.
Length = 613
Score = 76.2 bits (179), Expect = 3e-14
Identities = 29/58 (50%), Positives = 43/58 (74%)
Frame = +3
Query: 294 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 467
G+T+E++ KY +DPFW +R LFVLFW+AW+ M AGAIA++V +PKC + W++
Sbjct: 43 GLTKEQLEKYRNDPFWKPVRTILFVLFWLAWVLMFAGAIAIVVLSPKCAEKQKPDWWQ 100
>Z93375-4|CAB07562.2| 647|Caenorhabditis elegans Hypothetical
protein C38C6.2 protein.
Length = 647
Score = 51.2 bits (117), Expect = 9e-07
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 294 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIVRAPKCGPPEPRTWYE 467
G++ +E+ ++ +DP W +R LFVLFW+ WL + A AI ++ +P C W++
Sbjct: 78 GLSEQELEQFRNDPCWKFIRTVLFVLFWLIWLALFAVAILLVCFSPTCVLRAKPNWWQ 135
>AF068718-4|AAC17765.1| 98|Caenorhabditis elegans Hypothetical
protein R01B10.3 protein.
Length = 98
Score = 35.1 bits (77), Expect = 0.064
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 294 GMTREEVLKYADDPFWVNLRWSLFVLFWVAWLCMLAGAIAVIV 422
G + +E+ ++P W R++ +FW W +LAG+I +IV
Sbjct: 35 GYSLDELNAKREEPKWRVARYTAIAMFWGIWGALLAGSILIIV 77
>Z81050-6|CAB02856.1| 713|Caenorhabditis elegans Hypothetical
protein C50B6.7 protein.
Length = 713
Score = 33.1 bits (72), Expect = 0.26
Identities = 12/40 (30%), Positives = 26/40 (65%)
Frame = +3
Query: 573 QVPTYEVLDKRDTLDEFKILFNKIKKIGIRVIVDLIPNYV 692
Q +Y++ + EF+ + N+ K+G+R+IVD++ N++
Sbjct: 85 QPVSYKLDSRSGNEQEFQDMVNRCNKVGVRIIVDIVMNHM 124
>Z79603-2|CAB01893.4| 500|Caenorhabditis elegans Hypothetical
protein M163.2 protein.
Length = 500
Score = 30.7 bits (66), Expect = 1.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 458 CPGFGRAALGCAYNDCNSPGEHAQPGHPEQHEQR 357
C FG A CAY D +S +H + HPE H +
Sbjct: 351 CCDFGSCA--CAYTDPSSLRKHVKSKHPEHHAMK 382
>Z92833-9|CAD54141.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Frame = -1
Query: 500 IDQVQSDQGTEFVPCPGFGR---AALGCAYNDCNSPGEHAQPGHPEQHEQRPTQVHPEGI 330
I+ D TE + G L YN+ + G E+H + T G
Sbjct: 436 IEDCDMDSDTESIEDSGLAPEFDVDLAPIYNEKMEVDGEDEDGGEEEHVRTATMTFCNGF 495
Query: 329 VGILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 201
Q L RH + S + N R+++P+ P I H+ P
Sbjct: 496 FATSQALRRRHATGQRTASGQPNRRISVPLWPRRTSWIRHLVP 538
>Z81568-15|CAB04595.2| 610|Caenorhabditis elegans Hypothetical
protein K08E3.3b protein.
Length = 610
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -3
Query: 174 SSIVSLRRRRQISSPSICRGSFWTTGIQKSTS 79
S+ LRRR +ISSP I R SF + I+KS S
Sbjct: 509 STPTPLRRRAEISSPKILRSSF-SGAIRKSLS 539
>Z81568-14|CAB04591.2| 608|Caenorhabditis elegans Hypothetical
protein K08E3.3a protein.
Length = 608
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/32 (53%), Positives = 21/32 (65%)
Frame = -3
Query: 174 SSIVSLRRRRQISSPSICRGSFWTTGIQKSTS 79
S+ LRRR +ISSP I R SF + I+KS S
Sbjct: 509 STPTPLRRRAEISSPKILRSSF-SGAIRKSLS 539
>U41022-1|AAA82338.3| 303|Caenorhabditis elegans Hypothetical
protein K08B5.2 protein.
Length = 303
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = -1
Query: 338 EGIVGILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 201
E + +LQYLL + +FN+R++ P +P I + HP
Sbjct: 184 ETVSKVLQYLLENEIYLTKCVKAKFNVRLSSPDIPHLIMKFIECHP 229
>AL023842-11|CAD54168.2| 665|Caenorhabditis elegans Hypothetical
protein F38A6.3d protein.
Length = 665
Score = 29.5 bits (63), Expect = 3.2
Identities = 25/103 (24%), Positives = 38/103 (36%), Gaps = 3/103 (2%)
Frame = -1
Query: 500 IDQVQSDQGTEFVPCPGFGR---AALGCAYNDCNSPGEHAQPGHPEQHEQRPTQVHPEGI 330
I+ D TE + G L YN+ + G E+H + T G
Sbjct: 436 IEDCDMDSDTESIEDSGLAPEFDVDLAPIYNEKMEVDGEDEDGGEEEHVRTATMTFCNGF 495
Query: 329 VGILQYLLSRHPSELPFISIEFNLRVTIPVVPDDIFRIGHVHP 201
Q L RH + S + N R+++P+ P I H+ P
Sbjct: 496 FATSQALRRRHATGQRTASGQPNRRISVPLWPRRTSWIRHLVP 538
>Z68760-13|CAD30434.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 352 VGRCSCCSGWPGCACSPGLLQSLYAHPSAARPNPGHGTNSVP 477
V C C GW G C +Q+ YA P R N T+++P
Sbjct: 179 VPSCHCPQGWEGTRCDRHYVQAFYA-PINGRYNQS-STSAIP 218
>U39644-2|AAA80360.2| 966|Caenorhabditis elegans Hypothetical
protein T10E10.4 protein.
Length = 966
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +1
Query: 322 MPTIPSG*TCVGRCSCCSGWP-GCACSPGL 408
+P P+G T GRCS +G P G AC GL
Sbjct: 474 IPFCPNGVTARGRCSQVNGCPMGQACMEGL 503
>AL032641-7|CAD30455.1| 423|Caenorhabditis elegans Hypothetical
protein F36H1.4c protein.
Length = 423
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/42 (35%), Positives = 20/42 (47%)
Frame = +1
Query: 352 VGRCSCCSGWPGCACSPGLLQSLYAHPSAARPNPGHGTNSVP 477
V C C GW G C +Q+ YA P R N T+++P
Sbjct: 179 VPSCHCPQGWEGTRCDRHYVQAFYA-PINGRYNQS-STSAIP 218
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Frame = -1
Query: 404 PGEHAQPGHPEQHEQRPT---QVHPEGI-VGILQYLLSRHPSE 288
P +H HP QH+ +P Q HP G +G+ S PS+
Sbjct: 539 PMQHHPQQHPSQHQTQPNQQQQQHPSGYGIGVSTAPASMEPSQ 581
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/26 (46%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Frame = -1
Query: 404 PGEHAQPGHPEQHEQR---PTQVHPE 336
P + QP HP QH+Q P Q HP+
Sbjct: 520 PQQQQQPQHPHQHQQPASVPMQHHPQ 545
>Z68009-1|CAA92003.1| 1095|Caenorhabditis elegans Hypothetical protein
R09A8.1 protein.
Length = 1095
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/58 (27%), Positives = 31/58 (53%)
Frame = -2
Query: 424 RTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCRLLASSSIFAS 251
RT +A+ A + ++ SD+ F+Q+ + + T + +P+ L +SSSI A+
Sbjct: 848 RTKSAVTTAC--TSTSKQAARSDEPFFSQRDTRQHSYTQRVQVPIGAALHSSSSIAAN 903
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 27.9 bits (59), Expect = 9.6
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 97 SGRPKRTSANRRRRYLPTAPKRNY*RRKT 183
+GR KR+S +R+R+ P P+R+ + KT
Sbjct: 195 TGREKRSSEDRKRQVPPEEPRRSSHQSKT 223
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,123,595
Number of Sequences: 27780
Number of extensions: 402276
Number of successful extensions: 1563
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1561
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -