Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N17
         (848 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At2g38470.1 68415.m04725 WRKY family transcription factor contai...    34   0.14 
At1g69830.1 68414.m08034 alpha-amylase, putative / 1,4-alpha-D-g...    29   3.9  
At3g26350.1 68416.m03287 expressed protein  ; expression support...    29   5.2  
At2g39930.1 68415.m04907 isoamylase, putative / starch debranchi...    29   5.2  
At5g59130.1 68418.m07411 subtilase family protein contains simil...    28   9.0  

>At2g38470.1 68415.m04725 WRKY family transcription factor contains
           Pfam profile: PF03106 WRKY DNA -binding domain;
          Length = 519

 Score = 33.9 bits (74), Expect = 0.14
 Identities = 22/63 (34%), Positives = 30/63 (47%)
 Frame = -2

Query: 397 SMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVNCRLLASSSIFASPFLWSPTTYFA 218
           +M +  T+ N N       Q G ++  S   L IP   R  A SSI  SP L SP+T F+
Sbjct: 7   TMDNSRTRQNMNGSANWSQQSGRTSTSSLEDLEIP-KFRSFAPSSISISPSLVSPSTCFS 65

Query: 217 SDM 209
             +
Sbjct: 66  PSL 68


>At1g69830.1 68414.m08034 alpha-amylase, putative /
           1,4-alpha-D-glucan glucanohydrolase, putative similar to
           SP|P17859 Alpha-amylase precursor (EC 3.2.1.1)
           (1,4-alpha-D-glucan glucanohydrolase) {Vigna mungo},
           alpha-amylase [Malus x domestica] GI:7532799; contains
           Pfam profile PF00128: Alpha amylase, catalytic domain
          Length = 887

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = +3

Query: 585 YEVLDKRDTLDEFKILFNKIKKIGIRVIVDLIPNY 689
           Y +  +  T+DE K    K  K+GI+V+ D + N+
Sbjct: 551 YNLNSRYGTIDELKDTVKKFHKVGIKVLGDAVLNH 585


>At3g26350.1 68416.m03287 expressed protein  ; expression supported
           by MPSS
          Length = 356

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
 Frame = -1

Query: 431 GCAYNDCNSPGEHAQP-GHPEQHEQRPTQVHPEGIVGILQYLLSRHPSELPFISIEFNLR 255
           G + +  +S   H  P  HP++   + TQ HP    GIL     RH  E P    + ++ 
Sbjct: 27  GASTSQTSSNQPHIPPIPHPKKSHHKTTQPHPVAPPGILIKTRGRH-RENPIQEPKHSV- 84

Query: 254 VTIPVVPDD 228
           + +P+ P++
Sbjct: 85  IPVPLSPEE 93


>At2g39930.1 68415.m04907 isoamylase, putative / starch debranching
           enzyme, putative similar to isoamylase from [Solanum
           tuberosum] GI:27728145, [Triticum aestivum] GI:17932898,
           [Hordeum vulgare] GI:21314275, [Oryza sativa]
           GI:3252794; contains Pfam profiles PF00128: Alpha
           amylase catalytic domain, PF02922: Isoamylase N-terminal
           domain
          Length = 783

 Score = 28.7 bits (61), Expect = 5.2
 Identities = 12/26 (46%), Positives = 19/26 (73%)
 Frame = +3

Query: 612 LDEFKILFNKIKKIGIRVIVDLIPNY 689
           ++EFKIL  +  K GI VI+D++ N+
Sbjct: 315 INEFKILVKEAHKRGIEVIMDVVLNH 340


>At5g59130.1 68418.m07411 subtilase family protein contains
           similarity to prepro-cucumisin GI:807698 from [Cucumis
           melo]
          Length = 732

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = +1

Query: 370 CSGWPGCACSPGLLQSLYAHPSAARPNPGHGTNS 471
           C+G     C+  L+ + +  P  AR + GHGT++
Sbjct: 167 CAGGKNFTCNNKLIGARHYSPGDARDSTGHGTHT 200


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,945,790
Number of Sequences: 28952
Number of extensions: 362412
Number of successful extensions: 1108
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1108
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1970388800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)