Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N13
         (861 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0543 - 7039139-7039573                                           29   4.8  
07_03_1243 + 25134422-25135201                                         28   8.3  

>04_01_0543 - 7039139-7039573
          Length = 144

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +2

Query: 359 SGFMSPMSPPEMKPDTAMLDGFRDDSTXXXXXXXXXXXXXLSGSKHLCSIC 511
           +G  SP+ PP + P TA L G R  +T             L G+ + C  C
Sbjct: 8   NGGRSPLVPPPLSPPTAPLGGSRIVTTGHLQAALAMVGQPLDGNDNGCHRC 58


>07_03_1243 + 25134422-25135201
          Length = 259

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
 Frame = +2

Query: 482 SGSKHLCSICGDRASG-KHYGVYSC-----EGCKGFFKRTV 586
           S S+H+C IC  + SG   Y   +C     E C  +FK T+
Sbjct: 24  SASRHVCDICEAKLSGLVGYRCNACDFDIHEACADYFKETI 64


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,358,520
Number of Sequences: 37544
Number of extensions: 294906
Number of successful extensions: 590
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 590
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)