Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_N12
(842 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.) 336 1e-92
SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.) 294 7e-80
SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.) 254 7e-68
SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.) 154 1e-37
SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0) 92 4e-19
SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056) 85 9e-17
SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.22
SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23) 31 0.89
SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20) 31 1.2
SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0) 29 3.6
SB_20311| Best HMM Match : PAN (HMM E-Value=0.00055) 29 6.2
SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.2
>SB_46130| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 407
Score = 336 bits (826), Expect = 1e-92
Identities = 156/228 (68%), Positives = 183/228 (80%)
Frame = +1
Query: 145 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 324
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACET+ KTGM+LLCGEITS A
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACETVAKTGMILLCGEITSNA 88
Query: 325 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 504
VDYQ VVR+ +K IGYDDS KGFDYKTC+V++AL+QQS +IA GVH R +E+VGAGDQ
Sbjct: 89 VVDYQSVVRQCIKDIGYDDSEKGFDYKTCNVLVALEQQSVDIAHGVHVGREEEDVGAGDQ 148
Query: 505 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGAT 684
GLMFGYATDETEE MPLTVVLAHK+NQK+AE RR+G WARPDSKTQVT EY F G
Sbjct: 149 GLMFGYATDETEELMPLTVVLAHKMNQKLAEYRRDGTLPWARPDSKTQVTVEYKFEHGRA 208
Query: 685 VPQRVHTVXVSLQHSEXITLKXLRDEIREXVSKRLSLHNILMKELXSH 828
+P RVHT+ +S+QH IT++ LR E+ E + K + L ++ H
Sbjct: 209 IPLRVHTIVISVQHDPTITMENLRKELMEKIVKTVVPSKFLDEDTIFH 256
>SB_11655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 294 bits (721), Expect = 7e-80
Identities = 138/217 (63%), Positives = 163/217 (75%)
Frame = +1
Query: 127 YDMEDGSVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCG 306
Y D FLFTSESV EGH DKMCDQISDA+LDAHL QDP AKVACET TKTG+VLL G
Sbjct: 44 YSTSDCDNFLFTSESVNEGHSDKMCDQISDAVLDAHLEQDPYAKVACETATKTGLVLLFG 103
Query: 307 EITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEE 486
EITS A VDYQ VVR T++ IGY+DSS GFDYKTCSV+LA+ +Q IA VH NR D+E
Sbjct: 104 EITSNARVDYQAVVRNTIRDIGYNDSSTGFDYKTCSVLLAIQEQVAEIAQTVHLNRRDDE 163
Query: 487 VGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYV 666
+GAGDQGLMFGYATDETEE MPLT VLAHKL ++AE R+ W PD KTQVT +Y
Sbjct: 164 IGAGDQGLMFGYATDETEELMPLTTVLAHKLCARLAECRKGKILPWLLPDGKTQVTVDYR 223
Query: 667 FAGGATVPQRVHTVXVSLQHSEXITLKXLRDEIREXV 777
GA +P+RVHTV +S QH+ + ++ +R ++E +
Sbjct: 224 LERGACIPERVHTVLISTQHTPDVGIEEIRHHLKETI 260
>SB_47946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 460
Score = 254 bits (622), Expect = 7e-68
Identities = 114/173 (65%), Positives = 141/173 (81%)
Frame = +1
Query: 271 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 450
++ KTGM+++CGEITS ANVDYQKVVR+T+K IGYDDSSKGFDYKTC+V+ A++QQSP+I
Sbjct: 2 SVAKTGMIVVCGEITSLANVDYQKVVRDTIKQIGYDDSSKGFDYKTCTVLQAIEQQSPDI 61
Query: 451 AAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWAR 630
A GVH R+DE++GAGDQGLMFGYATDET+E MPLTVVLAH LN+++A+ RRNG W R
Sbjct: 62 AQGVHIGRSDEDLGAGDQGLMFGYATDETDELMPLTVVLAHGLNKRLADCRRNGSLPWVR 121
Query: 631 PDSKTQVTCEYVFAGGATVPQRVHTVXVSLQHSEXITLKXLRDEIREXVSKRL 789
PDSKTQVT EY F GG VP RVHT+ +S+QH I L +R E+ + V K +
Sbjct: 122 PDSKTQVTVEYKFQGGKAVPLRVHTIVISVQHDPNIELDVMRKELMDYVVKEV 174
>SB_46129| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 91
Score = 154 bits (373), Expect = 1e-37
Identities = 68/82 (82%), Positives = 77/82 (93%)
Frame = +1
Query: 145 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 324
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVACE++ KTGM+++CGEITS A
Sbjct: 9 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVACESVAKTGMIVVCGEITSLA 68
Query: 325 NVDYQKVVRETVKHIGYDDSSK 390
NVDYQKVVR+T+K IGYDDSSK
Sbjct: 69 NVDYQKVVRDTIKQIGYDDSSK 90
>SB_16847| Best HMM Match : S-AdoMet_synt_M (HMM E-Value=0)
Length = 192
Score = 92.3 bits (219), Expect = 4e-19
Identities = 48/101 (47%), Positives = 65/101 (64%)
Frame = +1
Query: 481 EEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCE 660
E+ GAGDQGLMFGYAT+ET+ MP V AH+L ++ +ELRRNG W RPD+K+QVT
Sbjct: 8 EDQGAGDQGLMFGYATNETDSLMPAPVYYAHRLVERQSELRRNGTLPWLRPDAKSQVTIN 67
Query: 661 YVFAGGATVPQRVHTVXVSLQHSEXITLKXLRDEIREXVSK 783
+ G + +V V +S QH I+L LR+ + E + K
Sbjct: 68 W--EGDS---PKVDAVVLSTQHDPSISLDDLREAVLENIIK 103
>SB_53305| Best HMM Match : S-AdoMet_synt_N (HMM E-Value=0.0056)
Length = 70
Score = 84.6 bits (200), Expect = 9e-17
Identities = 37/41 (90%), Positives = 39/41 (95%)
Frame = +1
Query: 145 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 267
+ FLFTSESVGEGHPDKMCDQISDAILDAHL QDP+AKVAC
Sbjct: 29 NTFLFTSESVGEGHPDKMCDQISDAILDAHLKQDPNAKVAC 69
>SB_18815| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 29 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 163
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 416 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 461
>SB_54100| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3287
Score = 33.5 bits (73), Expect = 0.22
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +2
Query: 29 RGTVWGYISGLTLNSECRRLQK*MDTRK-PTDTVMIWKMDQYFCSH 163
RG VW ++GL+ N E K + T++ PT+ V++W + + F +H
Sbjct: 70 RGQVWQMMAGLSENDELVDSYKHLFTKESPTEQVIVWDIHRTFPAH 115
>SB_15158| Best HMM Match : Cadherin (HMM E-Value=7.5e-23)
Length = 390
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = +1
Query: 304 GEITSKANVDYQKVVRETV---KHIGYDDSSKGFDYK 405
GEITS N+D +K+ + K I YD G+DY+
Sbjct: 103 GEITSNVNIDREKLPGSNLLEFKAIAYDAKGAGYDYR 139
>SB_17763| Best HMM Match : IBN_N (HMM E-Value=3.4e-20)
Length = 681
Score = 31.1 bits (67), Expect = 1.2
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = -2
Query: 526 LHNRTSSPGLLPQLPRHFCSHAPQQQCLVIVGL 428
L N T+ P + PQ P H SHA + ++I G+
Sbjct: 99 LGNETARPAIAPQEPEHLVSHANKILTVIIQGM 131
>SB_31747| Best HMM Match : Myotub-related (HMM E-Value=0)
Length = 550
Score = 29.5 bits (63), Expect = 3.6
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -1
Query: 272 VSHATFASGS*FRCASRIASLIWSHILSG 186
+S + A + FRC+ R S++W H+ +G
Sbjct: 287 ISDSDLAKVASFRCSGRFPSIVWRHMTNG 315
>SB_20311| Best HMM Match : PAN (HMM E-Value=0.00055)
Length = 443
Score = 28.7 bits (61), Expect = 6.2
Identities = 20/77 (25%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Frame = +3
Query: 438 ITKHCC-WGA*EQK*RGSWGRRPGL-DVRLCNR*DRRMHAVDCSACTQTQSENCRAQAKW 611
+T++C WG+ G WG+ L D R CS C Q Q E + W
Sbjct: 259 LTRNCAKWGSNGTLPEGEWGKNALLKDGTKTETSKIRRQFQQCSVCYQIQPETTKCFIAW 318
Query: 612 RILVGKTRFKNTGYLRI 662
+ + Y+RI
Sbjct: 319 TKSLRTILHRRKKYIRI 335
>SB_2549| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1155
Score = 28.7 bits (61), Expect = 6.2
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 76 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 252
MP G +K N + D D +L +S+ + D++C + I AHL QDPD
Sbjct: 196 MPYGGGKRGKSKKNSSTLDTGDLETWLKGRKSITRVRNHDELCAARALVIGMAHLTQDPD 255
>SB_14617| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 598
Score = 28.3 bits (60), Expect = 8.2
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Frame = +1
Query: 76 MPETSKMNGYAKTNGHSYDMEDGSVFLFTSESVGE-GHPDKMCDQISDAILDAHLNQDPD 252
MP + G +K N + D D +L S+ + D++C + I AHL +DPD
Sbjct: 241 MPFGAGKRGKSKKNSSTLDTGDLETWLKGKRSITRVRNHDELCAARATVIGMAHLTKDPD 300
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,930,067
Number of Sequences: 59808
Number of extensions: 635843
Number of successful extensions: 1614
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1514
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1613
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2383424791
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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