Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_N12
(842 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 336 1e-92
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 336 1e-92
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 332 1e-91
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 322 3e-88
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 246 1e-65
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 243 1e-64
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 195 3e-50
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 192 3e-49
U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical pr... 149 3e-36
U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical pr... 80 2e-15
U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.44
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 32 0.44
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 32 0.44
U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine rece... 30 2.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.1
U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical pr... 28 7.2
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 28 7.2
U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical p... 28 9.5
U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical p... 28 9.5
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 336 bits (825), Expect = 1e-92
Identities = 156/226 (69%), Positives = 185/226 (81%)
Frame = +1
Query: 151 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 330
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 331 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 510
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 511 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 690
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 691 QRVHTVXVSLQHSEXITLKXLRDEIREXVSKRLSLHNILMKELXSH 828
RVHTV +S QHS I+L LR E+ E V K + N++ + H
Sbjct: 186 LRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYH 231
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 336 bits (825), Expect = 1e-92
Identities = 156/226 (69%), Positives = 185/226 (81%)
Frame = +1
Query: 151 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 330
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 331 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 510
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGI 125
Query: 511 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 690
MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACVP 185
Query: 691 QRVHTVXVSLQHSEXITLKXLRDEIREXVSKRLSLHNILMKELXSH 828
RVHTV +S QHS I+L LR E+ E V K + N++ + H
Sbjct: 186 LRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYH 231
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 332 bits (817), Expect = 1e-91
Identities = 156/226 (69%), Positives = 184/226 (81%)
Frame = +1
Query: 151 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 330
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 331 DYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGL 510
DYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH +++ +VGAGDQG+
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHVDKDIADVGAGDQGI 125
Query: 511 MFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVP 690
MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQVT EY GGA VP
Sbjct: 126 MFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQVTIEYSSEGGACVP 185
Query: 691 QRVHTVXVSLQHSEXITLKXLRDEIREXVSKRLSLHNILMKELXSH 828
RVHTV +S QHS I+L+ LR E+ E V K + N++ + H
Sbjct: 186 LRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYH 231
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 322 bits (790), Expect = 3e-88
Identities = 150/228 (65%), Positives = 184/228 (80%)
Frame = +1
Query: 145 SVFLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKA 324
S FLFTSESV EGHPDKMCDQISDA+LDAHL QDP+AKVACET+TKTGMV+LCGEITSKA
Sbjct: 3 SKFLFTSESVSEGHPDKMCDQISDAVLDAHLKQDPNAKVACETVTKTGMVMLCGEITSKA 62
Query: 325 NVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQ 504
VDYQ +VR ++ IG+ DSS GFD+KTC+V++AL+QQSP IAAGVH N++ E+VGAGDQ
Sbjct: 63 VVDYQVLVRRVIEKIGFTDSSIGFDHKTCNVLVALEQQSPEIAAGVHVNKDGEDVGAGDQ 122
Query: 505 GLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGAT 684
G+MFGYATDETEE MPLT++L+HK+N ++ +LRRNG W RPDSK+QVT EY GAT
Sbjct: 123 GIMFGYATDETEETMPLTLILSHKINAELHKLRRNGTLPWVRPDSKSQVTIEYESRHGAT 182
Query: 685 VPQRVHTVXVSLQHSEXITLKXLRDEIREXVSKRLSLHNILMKELXSH 828
+P RVHTV VS QHS +TL+ LR+ I V K++ ++L + H
Sbjct: 183 IPLRVHTVVVSTQHSPDVTLEKLRETILADVIKKVIPASLLDESTVFH 230
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 246 bits (603), Expect = 1e-65
Identities = 115/180 (63%), Positives = 142/180 (78%)
Frame = +1
Query: 289 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 468
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 469 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQ 648
+++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQ
Sbjct: 61 DKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQ 120
Query: 649 VTCEYVFAGGATVPQRVHTVXVSLQHSEXITLKXLRDEIREXVSKRLSLHNILMKELXSH 828
VT EY GGA VP RVHTV +S QHS I+L LR E+ E V K + N++ + H
Sbjct: 121 VTIEYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYH 180
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 243 bits (595), Expect = 1e-64
Identities = 115/180 (63%), Positives = 141/180 (78%)
Frame = +1
Query: 289 MVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHE 468
M++LCGEITSKA VDYQ +VR +K IGYDDSSKGFDYKTC+V++AL+QQSP IAAGVH
Sbjct: 1 MIMLCGEITSKAVVDYQVLVRNVIKKIGYDDSSKGFDYKTCNVLVALEQQSPEIAAGVHV 60
Query: 469 NRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQ 648
+++ +VGAGDQG+MFGYATDETEE MPLT++L+HKLN K+ ELRR+GE W RPDSKTQ
Sbjct: 61 DKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKLHELRRSGELEWVRPDSKTQ 120
Query: 649 VTCEYVFAGGATVPQRVHTVXVSLQHSEXITLKXLRDEIREXVSKRLSLHNILMKELXSH 828
VT EY GGA VP RVHTV +S QHS I+L+ LR E+ E V K + N++ + H
Sbjct: 121 VTIEYSSEGGACVPLRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYH 180
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 195 bits (476), Expect = 3e-50
Identities = 91/153 (59%), Positives = 115/153 (75%)
Frame = +1
Query: 370 GYDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECM 549
GY D GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE M
Sbjct: 20 GYFDYRNGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAM 79
Query: 550 PLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVXVSLQHS 729
PLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTV +S QHS
Sbjct: 80 PLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVISTQHS 139
Query: 730 EXITLKXLRDEIREXVSKRLSLHNILMKELXSH 828
I+L LR E+ V K + N++ + H
Sbjct: 140 PDISLDDLRKELIVKVIKAVIPANLIDDKTIYH 172
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 192 bits (467), Expect = 3e-49
Identities = 91/158 (57%), Positives = 117/158 (74%), Gaps = 3/158 (1%)
Frame = +1
Query: 364 HIGYDDSSK---GFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE 534
H+ D +K GFDYKTC+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDE
Sbjct: 33 HLAQDPHAKVACGFDYKTCNVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDE 92
Query: 535 TEECMPLTVVLAHKLNQKIAELRRNGEFWWARPDSKTQVTCEYVFAGGATVPQRVHTVXV 714
TEE MPLT++L+HKLN+K+ ELRR+GE W RPDSKTQVT EY GGA +P RVHTV +
Sbjct: 93 TEEAMPLTLLLSHKLNRKLHELRRSGELEWVRPDSKTQVTIEYASEGGACIPLRVHTVVI 152
Query: 715 SLQHSEXITLKXLRDEIREXVSKRLSLHNILMKELXSH 828
S QHS I+L LR E+ V K + N++ + H
Sbjct: 153 STQHSPDISLDDLRKELIVKVIKAVIPANLIDDKTIYH 190
Score = 83.0 bits (196), Expect = 2e-16
Identities = 47/86 (54%), Positives = 53/86 (61%)
Frame = +1
Query: 151 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 330
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC KT VL+ E S
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACGFDYKTCNVLVALEQQSPEIA 65
Query: 331 DYQKVVRETVKHIGYDDSSKGFDYKT 408
V +++ +G D F Y T
Sbjct: 66 AGVHVDKDS-DDVGAGDQGIMFGYAT 90
>U41009-5|AAO44915.1| 173|Caenorhabditis elegans Hypothetical
protein C06E7.1d protein.
Length = 173
Score = 149 bits (360), Expect = 3e-36
Identities = 67/81 (82%), Positives = 73/81 (90%)
Frame = +1
Query: 151 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVACETITKTGMVLLCGEITSKANV 330
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVACET+TKTGM++LCGEITSKA V
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVACETVTKTGMIMLCGEITSKAVV 65
Query: 331 DYQKVVRETVKHIGYDDSSKG 393
DYQ +VR +K IGYDDSSKG
Sbjct: 66 DYQVLVRNVIKKIGYDDSSKG 86
Score = 30.3 bits (65), Expect = 1.8
Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)
Frame = +2
Query: 329 WIIKKLCAKRSNILVMMIRPKAL----ITRHAV*CSH*TNNHQTLLLGCMRTEMTRKLGQ 496
W+I LC + S+ L ++I+ ITRHA+ H NNH LL T +
Sbjct: 97 WLIT-LC-QESHFLGLLIKYSIQFQDSITRHAMFLLHSNNNHLKSLLESTWTRIVTMSEP 154
Query: 497 ETRA*CSVMQQMRQKNAC 550
E + C M M+ K C
Sbjct: 155 EIKELCLDMLLMKPKKRC 172
>U41009-7|AAN84884.1| 51|Caenorhabditis elegans Hypothetical
protein C06E7.1c protein.
Length = 51
Score = 79.8 bits (188), Expect = 2e-15
Identities = 35/39 (89%), Positives = 36/39 (92%)
Frame = +1
Query: 151 FLFTSESVGEGHPDKMCDQISDAILDAHLNQDPDAKVAC 267
FLFTSESV EGHPDKMCDQISDA+LDAHL QDP AKVAC
Sbjct: 6 FLFTSESVSEGHPDKMCDQISDAVLDAHLAQDPHAKVAC 44
>U41009-6|AAK68167.2| 84|Caenorhabditis elegans Hypothetical
protein C06E7.1b protein.
Length = 84
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 151 FLFTSESVGEGHPDKMCDQ 207
FLFTSESV EGHPDKMCDQ
Sbjct: 6 FLFTSESVSEGHPDKMCDQ 24
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 217 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 357
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 217 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 357
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 32.3 bits (70), Expect = 0.44
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Frame = +1
Query: 217 AILDAHLNQDPDAKVACETITKTGM-VLLCGEITSKANVDYQKVVRET 357
A +D ++ Q P+ +C + G VL+ E +KAN+DY ++ +ET
Sbjct: 290 ACIDENMEQPPEGDWSCPHCEEHGPDVLIVEEEPAKANMDYCRICKET 337
>U61946-2|AAC24387.1| 341|Caenorhabditis elegans Serpentine
receptor, class h protein220 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.4
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 644 HRLLANMYLLVVQQSHREFILXSC 715
H L++ + +LVVQ+ +REFI SC
Sbjct: 287 HGLVSTLVMLVVQKPYREFISKSC 310
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.5 bits (63), Expect = 3.1
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 373 YDDSSKGFDYKTCSVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDE-TEECM 549
+DD+S+ + T + DQQ N + ++GA GL +++ T++
Sbjct: 225 HDDNSQPIEILTRILSKTSDQQWENFIGLLETIEKSTDIGASISGLRVSCSSNVLTKDSE 284
Query: 550 PLTVVLAHKLNQKIAELRRN 609
T V+ KLN++ E RN
Sbjct: 285 TQTDVVQRKLNKERREPSRN 304
>U49956-1|AAO38615.1| 669|Caenorhabditis elegans Hypothetical
protein M03A1.3 protein.
Length = 669
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +1
Query: 271 TITKTGMVLLCGEITSKANVDYQKVVRETVKHIGYDDSSKGFDYKTCSVMLALDQQSPNI 450
T+T+TG L + + ++++ K + D ++K D KTC L +DQ N+
Sbjct: 37 TLTRTGDSLNLRIYDENSAIRKVHILQKEGKDVLVDCTNKKEDGKTCEAQLTVDQFEKNL 96
Query: 451 AAGV 462
+
Sbjct: 97 PISI 100
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 3/34 (8%)
Frame = +2
Query: 317 PKLTWIIKKLCAKRSNIL---VMMIRPKALITRH 409
PK+ W ++K+C K+ +I + I P+ L+T H
Sbjct: 253 PKIVWHLEKMCNKKEDISRGNPVSIPPQRLLTHH 286
>U28991-14|AAA68388.1| 352|Caenorhabditis elegans Hypothetical
protein F08F8.1 protein.
Length = 352
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 390 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 268
FGR D NF H FG HH GF +GF
Sbjct: 149 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 189
>U28991-13|AAA68387.1| 281|Caenorhabditis elegans Hypothetical
protein F08F8.5 protein.
Length = 281
Score = 27.9 bits (59), Expect = 9.5
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -3
Query: 390 FGRIIITNMFDRFAHNFLIIHVSFGCDFATQKHHTGFSYGF 268
FGR D NF H FG HH GF +GF
Sbjct: 223 FGRPFGRRGMDHHGFNFHRHHHPFGAFHGFGGHHHGFGHGF 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,597,305
Number of Sequences: 27780
Number of extensions: 471237
Number of successful extensions: 1272
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1271
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2087513582
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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