Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_N10
(844 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein. 66 1e-12
AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein. 66 1e-12
AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein. 66 1e-12
AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein. 66 1e-12
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 41 4e-05
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript... 24 0.53
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ... 25 3.8
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 25 3.8
>AY334011-1|AAR01136.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 66.1 bits (154), Expect = 1e-12
Identities = 31/80 (38%), Positives = 45/80 (56%)
Frame = +2
Query: 425 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 604
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 605 LEFAIYPAPQVSTAVVEPYN 664
+++ P+P+VS VVEPYN
Sbjct: 61 NTYSVVPSPKVSDTVVEPYN 80
Score = 32.7 bits (71), Expect = 0.014
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D + +DNEA+YDIC R L +
Sbjct: 89 VENTDETYCIDNEALYDICFRTLKV 113
>AY334010-1|AAR01135.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 66.1 bits (154), Expect = 1e-12
Identities = 31/80 (38%), Positives = 45/80 (56%)
Frame = +2
Query: 425 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 604
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 605 LEFAIYPAPQVSTAVVEPYN 664
+++ P+P+VS VVEPYN
Sbjct: 61 NTYSVVPSPKVSDTVVEPYN 80
Score = 32.7 bits (71), Expect = 0.014
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D + +DNEA+YDIC R L +
Sbjct: 89 VENTDETYCIDNEALYDICFRTLKV 113
>AY334009-1|AAR01134.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 66.1 bits (154), Expect = 1e-12
Identities = 31/80 (38%), Positives = 45/80 (56%)
Frame = +2
Query: 425 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 604
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 605 LEFAIYPAPQVSTAVVEPYN 664
+++ P+P+VS VVEPYN
Sbjct: 61 NTYSVVPSPKVSDTVVEPYN 80
Score = 32.7 bits (71), Expect = 0.014
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D + +DNEA+YDIC R L +
Sbjct: 89 VENTDETYCIDNEALYDICFRTLKV 113
>AY334008-1|AAR01133.1| 188|Anopheles gambiae beta-tubulin protein.
Length = 188
Score = 66.1 bits (154), Expect = 1e-12
Identities = 31/80 (38%), Positives = 45/80 (56%)
Frame = +2
Query: 425 HYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSK 604
HYT G E+VD VLD +RK + C LQGF + H LL+ ++ +Y +
Sbjct: 1 HYTEGAELVDAVLDVVRKECENCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIM 60
Query: 605 LEFAIYPAPQVSTAVVEPYN 664
+++ P+P+VS VVEPYN
Sbjct: 61 NTYSVVPSPKVSDTVVEPYN 80
Score = 32.7 bits (71), Expect = 0.014
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D + +DNEA+YDIC R L +
Sbjct: 89 VENTDETYCIDNEALYDICFRTLKV 113
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 41.1 bits (92), Expect = 4e-05
Identities = 26/68 (38%), Positives = 28/68 (41%)
Frame = +3
Query: 162 PAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASTYPVXXXXXXXXXXXXXX 341
P T WS AS+ RCP+TR S ST SS R AST PV
Sbjct: 19 PCWDCTVWSMASNRTVRCPRTRRSEAVMTRSTPSSPRLAQASTCPVPCSSIWSRPSSMRC 78
Query: 342 XXAHTDSC 365
A T SC
Sbjct: 79 APARTASC 86
Score = 36.7 bits (81), Expect = 9e-04
Identities = 15/23 (65%), Positives = 18/23 (78%)
Frame = +2
Query: 104 KCVSASLXHVGQAGVQIGNACWE 172
+C+S HVGQAGVQIGN CW+
Sbjct: 3 ECISV---HVGQAGVQIGNPCWD 22
>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
protein.
Length = 1248
Score = 23.8 bits (49), Expect(2) = 0.53
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = +3
Query: 213 CPQTRPSGVETILSTLSSARPELAS 287
C RPS ++ ++ S RP+LA+
Sbjct: 164 CGSARPSRIDVAFASPSICRPDLAA 188
Score = 21.8 bits (44), Expect(2) = 0.53
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +3
Query: 156 VMPAGSFTAWSTASSLMARCPQTRPSGV 239
V+ AG F AW TA +T+P G+
Sbjct: 116 VLLAGDFNAWHTAWG----SERTKPKGI 139
>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
protein.
Length = 1087
Score = 24.6 bits (51), Expect = 3.8
Identities = 19/67 (28%), Positives = 30/67 (44%)
Frame = +3
Query: 87 EKNSNQNA*VHLXYTLAKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSS 266
+KN+ + A + L YT P+S + + S + S+M R E L+T S
Sbjct: 276 DKNNPRLALIFLGYTTPPPDSDGIKYSDSLLGQLLSLSIMPRNHNGPYEYYENPLTTNRS 335
Query: 267 ARPELAS 287
A L+S
Sbjct: 336 AVDSLSS 342
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 24.6 bits (51), Expect = 3.8
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = -3
Query: 197 GCRAPGSKAPSRHYRSGLRLGQRVXEMHSR 108
G APGS+ RH R+G + + + E++ +
Sbjct: 32 GSPAPGSRHSIRHGRNGDKRSRMIKELYQQ 61
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 853,311
Number of Sequences: 2352
Number of extensions: 17594
Number of successful extensions: 42
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 89305416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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