Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_N10
(844 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 333 7e-92
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 333 7e-92
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 332 2e-91
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 332 2e-91
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 319 1e-87
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 319 1e-87
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 306 1e-83
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 164 6e-41
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 162 2e-40
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 161 5e-40
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 161 5e-40
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 160 1e-39
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 159 2e-39
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 158 4e-39
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 158 4e-39
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 154 8e-38
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 114 6e-26
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 114 8e-26
At1g66690.1 68414.m07580 S-adenosyl-L-methionine:carboxyl methyl... 31 1.3
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 1.3
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 2.2
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.9
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 28 8.9
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 28 8.9
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 28 8.9
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 333 bits (819), Expect = 7e-92
Identities = 150/187 (80%), Positives = 167/187 (89%)
Frame = +2
Query: 104 KCVSASLXHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 283
+C+S H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 3 ECISI---HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
Query: 284 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 463
KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL L
Sbjct: 60 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 464 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 643
DRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 644 AVVEPYN 664
+VVEPYN
Sbjct: 180 SVVEPYN 186
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDIERQPT 777
LEH+D + ++DNEAIYDICRR L IER PT
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLSIER-PT 223
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 768 PTYTXLNRLIGQIVSSXTXS 827
PTYT LNRL+ Q++SS T S
Sbjct: 222 PTYTNLNRLVSQVISSLTAS 241
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 333 bits (819), Expect = 7e-92
Identities = 150/187 (80%), Positives = 167/187 (89%)
Frame = +2
Query: 104 KCVSASLXHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 283
+C+S H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAG
Sbjct: 3 ECISI---HIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAG 59
Query: 284 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 463
KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL L
Sbjct: 60 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 464 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 643
DRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 644 AVVEPYN 664
+VVEPYN
Sbjct: 180 SVVEPYN 186
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDIERQPT 777
LEH+D + ++DNEAIYDICRR L IER PT
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLSIER-PT 223
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 768 PTYTXLNRLIGQIVSSXTXS 827
PTYT LNRL+ Q++SS T S
Sbjct: 222 PTYTNLNRLVSQVISSLTAS 241
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 332 bits (816), Expect = 2e-91
Identities = 150/187 (80%), Positives = 166/187 (88%)
Frame = +2
Query: 104 KCVSASLXHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 283
+C+S H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 3 ECISI---HIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
Query: 284 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 463
KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL L
Sbjct: 60 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 464 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 643
DRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 644 AVVEPYN 664
+VVEPYN
Sbjct: 180 SVVEPYN 186
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDIERQPT 777
LEH+D + ++DNEAIYDICRR L+IER PT
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLNIER-PT 223
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 768 PTYTXLNRLIGQIVSSXTXS 827
PTYT LNRL+ Q++SS T S
Sbjct: 222 PTYTNLNRLVSQVISSLTAS 241
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 332 bits (816), Expect = 2e-91
Identities = 150/187 (80%), Positives = 166/187 (88%)
Frame = +2
Query: 104 KCVSASLXHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 283
+C+S H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAG
Sbjct: 3 ECISI---HIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAG 59
Query: 284 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 463
KHVPRAVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL L
Sbjct: 60 KHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCL 119
Query: 464 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVST 643
DRIRKLAD CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST
Sbjct: 120 DRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVST 179
Query: 644 AVVEPYN 664
+VVEPYN
Sbjct: 180 SVVEPYN 186
Score = 47.2 bits (107), Expect = 1e-05
Identities = 21/30 (70%), Positives = 26/30 (86%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDIERQPT 777
LEH+D + ++DNEAIYDICRR L+IER PT
Sbjct: 195 LEHTDVSILLDNEAIYDICRRSLNIER-PT 223
Score = 32.7 bits (71), Expect = 0.31
Identities = 13/20 (65%), Positives = 16/20 (80%)
Frame = +3
Query: 768 PTYTXLNRLIGQIVSSXTXS 827
PTYT LNRL+ Q++SS T S
Sbjct: 222 PTYTNLNRLVSQVISSLTAS 241
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 319 bits (784), Expect = 1e-87
Identities = 142/179 (79%), Positives = 158/179 (88%)
Frame = +2
Query: 128 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 307
H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVF 67
Query: 308 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 487
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 488 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYN
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYN 186
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDIERQPT 777
LEH+D A ++DNEAIYDICRR LDIER PT
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIER-PT 223
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 768 PTYTXLNRLIGQIVSSXTXS 827
PTYT LNRLI QI+SS T S
Sbjct: 222 PTYTNLNRLISQIISSLTTS 241
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 319 bits (784), Expect = 1e-87
Identities = 142/179 (79%), Positives = 158/179 (88%)
Frame = +2
Query: 128 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 307
H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVF
Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVF 67
Query: 308 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 487
VDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD
Sbjct: 68 VDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLAD 127
Query: 488 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYN
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYN 186
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/30 (76%), Positives = 26/30 (86%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDIERQPT 777
LEH+D A ++DNEAIYDICRR LDIER PT
Sbjct: 195 LEHTDVAVLLDNEAIYDICRRSLDIER-PT 223
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/20 (75%), Positives = 16/20 (80%)
Frame = +3
Query: 768 PTYTXLNRLIGQIVSSXTXS 827
PTYT LNRLI QI+SS T S
Sbjct: 222 PTYTNLNRLISQIISSLTTS 241
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 306 bits (751), Expect = 1e-83
Identities = 134/179 (74%), Positives = 156/179 (87%)
Frame = +2
Query: 128 HVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 307
H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+HVPRAVF
Sbjct: 8 HIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVF 67
Query: 308 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 487
+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD
Sbjct: 68 LDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLAD 127
Query: 488 QCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYN
Sbjct: 128 NCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYN 186
Score = 48.4 bits (110), Expect = 6e-06
Identities = 22/30 (73%), Positives = 25/30 (83%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDIERQPT 777
LEH+D ++DNEAIYDICRR LDIER PT
Sbjct: 195 LEHTDVVVLLDNEAIYDICRRSLDIER-PT 223
Score = 29.9 bits (64), Expect = 2.2
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 768 PTYTXLNRLIGQIVSSXTXS 827
PTY+ LNRLI Q +SS T S
Sbjct: 222 PTYSNLNRLISQTISSLTTS 241
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 164 bits (399), Expect = 6e-41
Identities = 76/180 (42%), Positives = 110/180 (61%), Gaps = 3/180 (1%)
Frame = +2
Query: 134 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKHVPRAV 304
GQ G QIG+ WE+ C EHGI P G+ +G D + N +++E G++VPRA+
Sbjct: 10 GQCGNQIGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEASCGRYVPRAI 64
Query: 305 FVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLA 484
+DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A
Sbjct: 65 LMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEA 124
Query: 485 DQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
+ C LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 125 ENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D ++DNEA+YDIC R L +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL 217
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 162 bits (394), Expect = 2e-40
Identities = 73/177 (41%), Positives = 108/177 (61%)
Frame = +2
Query: 134 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 313
GQ G QIG+ WE+ C EHG+ P G+ D + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGRYVPRAVLMD 68
Query: 314 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 493
LEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 69 LEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 494 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 129 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 185
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D ++DNEA+YDIC R L +
Sbjct: 194 VENADECMVLDNEALYDICFRTLKL 218
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 161 bits (391), Expect = 5e-40
Identities = 74/177 (41%), Positives = 106/177 (59%)
Frame = +2
Query: 134 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 313
GQ G QIG WE+ C EHGI P G+ D + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMD 67
Query: 314 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 493
LEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 494 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D ++DNEA+YDIC R L +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL 217
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 161 bits (391), Expect = 5e-40
Identities = 74/177 (41%), Positives = 106/177 (59%)
Frame = +2
Query: 134 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 313
GQ G QIG WE+ C EHGI P G+ D + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMD 67
Query: 314 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 493
LEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 494 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D ++DNEA+YDIC R L +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL 217
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 160 bits (388), Expect = 1e-39
Identities = 73/177 (41%), Positives = 108/177 (61%)
Frame = +2
Query: 134 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 313
GQ G QIG+ WE+ C EHGI G+ D T + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVPRAVLMD 68
Query: 314 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 493
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 69 LEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENC 128
Query: 494 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 129 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 185
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D ++DNEA+YDIC R L +
Sbjct: 194 VENADECMVLDNEALYDICFRTLKL 218
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 159 bits (387), Expect = 2e-39
Identities = 74/177 (41%), Positives = 107/177 (60%)
Frame = +2
Query: 134 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 313
GQ G QIG WE+ C EHGI GQ D + + N +F+E GK+VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGKYVPRAVLMD 67
Query: 314 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 493
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 494 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
LQGF + H LL+ ++ +Y + + F+++P+P+VS VVEPYN
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYN 184
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D ++DNEA+YDIC R L +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL 217
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 158 bits (384), Expect = 4e-39
Identities = 73/177 (41%), Positives = 106/177 (59%)
Frame = +2
Query: 134 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 313
GQ G QIG WE+ C EHGI G+ + + + N +++E G+ VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGRFVPRAVLMD 67
Query: 314 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 493
LEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 494 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
LQGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYN 184
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D ++DNEA+YDIC R L +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL 217
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 158 bits (384), Expect = 4e-39
Identities = 73/177 (41%), Positives = 108/177 (61%)
Frame = +2
Query: 134 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 313
GQ G QIG+ WE+ LEHGI G+ D + + N +++E G++VPRAV +D
Sbjct: 10 GQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGRYVPRAVLMD 67
Query: 314 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 493
LEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C
Sbjct: 68 LEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENC 127
Query: 494 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
LQGF + H LL+ ++ +Y + + F+++P+P+VS VVEPYN
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYN 184
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D ++DNEA+YDIC R L +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL 217
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 154 bits (373), Expect = 8e-38
Identities = 72/177 (40%), Positives = 106/177 (59%)
Frame = +2
Query: 134 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 313
GQ G QIG WE+ C EHGI GQ D + + + +F+E GK+VPRAV +D
Sbjct: 10 GQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGKYVPRAVLMD 67
Query: 314 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 493
LEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+
Sbjct: 68 LEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENS 127
Query: 494 TGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYN 664
LQGF + H LL+ ++ +Y + + F+++P+P+VS VVEPYN
Sbjct: 128 DCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYN 184
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/25 (48%), Positives = 19/25 (76%)
Frame = +1
Query: 688 LEHSDCAFMVDNEAIYDICRRXLDI 762
+E++D ++DNEA+YDIC R L +
Sbjct: 193 VENADECMVLDNEALYDICFRTLKL 217
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 114 bits (275), Expect = 6e-26
Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 3/181 (1%)
Frame = +2
Query: 131 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 310
VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++PRA+ +
Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLI 67
Query: 311 DLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLA 484
DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + A
Sbjct: 68 DLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREA 126
Query: 485 DQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPY 661
D L+GF++ H L+E L+ Y KK ++++P + S VV+PY
Sbjct: 127 DGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPY 186
Query: 662 N 664
N
Sbjct: 187 N 187
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 114 bits (274), Expect = 8e-26
Identities = 63/181 (34%), Positives = 97/181 (53%), Gaps = 3/181 (1%)
Frame = +2
Query: 131 VGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 310
VGQ G QIG W+ CLEHGI DG + T GG D + FF + ++PRA+ +
Sbjct: 10 VGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLI 67
Query: 311 DLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKLA 484
DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I + A
Sbjct: 68 DLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREA 126
Query: 485 DQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPY 661
D L+GF++ H L+E L+ Y KK ++++P + S VV+PY
Sbjct: 127 DGSDSLEGFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPY 186
Query: 662 N 664
N
Sbjct: 187 N 187
>At1g66690.1 68414.m07580 S-adenosyl-L-methionine:carboxyl
methyltransferase family protein similar to
defense-related protein cjs1 [Brassica
carinata][GI:14009292][Mol Plant Pathol (2001)
2(3):159-169]
Length = 353
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 214 HLAIRLDAVLQAVKLPAGITDLDSGLANVXQRCT 113
H+A+ A L K+P GI D DS L N +CT
Sbjct: 140 HIAVMSYAFLFTSKIPKGIMDRDSPLWNKDMQCT 173
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 1.3
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -1
Query: 544 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 365
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 364 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 230
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 2.2
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 185 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 334
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 276 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 151
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 173 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 340
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 341 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 173 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 340
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 341 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 27.9 bits (59), Expect = 8.9
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 4/103 (3%)
Frame = +2
Query: 173 LYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAVFVD-LEPTVVDEV 340
LY L G P D +P K I GG + + S A +PR + VD ++ + E+
Sbjct: 208 LYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRMLIVDPVKRITIPEI 266
Query: 341 RTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 469
R + Q P L D + + I +E+V++ DR
Sbjct: 267 RQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,599,026
Number of Sequences: 28952
Number of extensions: 375409
Number of successful extensions: 1057
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1044
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1950880000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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