Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N09
         (866 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           23   4.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    22   5.4  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    22   5.4  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    22   7.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   9.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  

>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 269 SSELQCERTVCARQ*GPQQGKANTQQDSRR 358
           +S+L+C+R +     GPQQ  A+  + + R
Sbjct: 64  NSDLRCKRKIQFMPYGPQQQPASVARRNAR 93


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = -3

Query: 402 RRL*CNWKCRCRPQTRRESCWVFA----FPCCGPY*RAQTVRSHCSSDESLLPCQ 250
           + L CN K  C+ ++   SC V       P C P  +       CS+D + +P Q
Sbjct: 131 KELFCNGKPDCKDESDENSCTVETDPNRAPDCDPT-QCVLPDCFCSADGTRIPGQ 184


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/52 (21%), Positives = 22/52 (42%)
 Frame = +3

Query: 9   ATRSNTRSLNMTTSFSHSQVKTPSEEKWEAASEPDYHTNEDLLYPYSPIPYF 164
           AT +N+ + ++ +  S           W ++S+P   T       Y+  PY+
Sbjct: 208 ATYTNSANSSIWSPASIDSFTLEQHRSWCSSSQPVLSTTNSTTNCYNNYPYY 259


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 4/55 (7%)
 Frame = -3

Query: 402 RRL*CNWKCRCRPQTRRESCWVFAFP----CCGPY*RAQTVRSHCSSDESLLPCQ 250
           + L CN K  C+ ++   SC V   P     C P  +       CS+D + +P Q
Sbjct: 124 KELFCNGKPDCKDESDENSCTVETDPNRALDCDPT-QCVLPDCFCSADGTRIPGQ 177


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = -1

Query: 152 WGVWIQQVLICVVVW 108
           W  W+  + ICV  W
Sbjct: 475 WHTWMPVMRICVSAW 489


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 325 RESKYPTGFPSCLWTTATL-PVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKDSSLP 501
           R   YP  FP+  +    L P  S+ AA    PS    S     ++    + P   SSLP
Sbjct: 161 RPPMYP--FPAGQYPYPILSPEMSQVAASWHTPSMYPLSPGAGFRSPYPSALPISTSSLP 218

Query: 502 TDILKILTT 528
           +D  +   T
Sbjct: 219 SDFYRFSPT 227


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
 Frame = +1

Query: 325 RESKYPTGFPSCLWTTATL-PVTSETAALKLLPSARGRSVSGALQTSPGLSTPPKDSSLP 501
           R   YP  FP+  +    L P  S+ AA    PS    S     ++    + P   SSLP
Sbjct: 53  RPPMYP--FPAGQYPYPILSPEMSQVAASWHTPSMYPLSPGAGFRSPYPSALPISTSSLP 110

Query: 502 TDILKILTT 528
           +D  +   T
Sbjct: 111 SDFYRFSPT 119


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,025
Number of Sequences: 336
Number of extensions: 4091
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 23893023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)