Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N08
         (860 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    24   1.8  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.5  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -2

Query: 196 IFCVTFIDNLYIVIFSIFHYIF 131
           I   +F++N Y +IF +F   +
Sbjct: 288 IILTSFLNNFYFIIFQVFESFY 309


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 184 TFIDNLYIVIFSIFHYIFGNIIFCYNCSHSSAELL 80
           T I N+ ++ +      F NI+ C + +H++ ELL
Sbjct: 231 TIISNVTVISWQAV-CTFYNILLCDSVAHTAGELL 264


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 184 TFIDNLYIVIFSIFHYIFGNIIFCYNCSHSSAELL 80
           T I N+ ++ +      F NI+ C + +H++ ELL
Sbjct: 231 TIISNVTVISWQAV-CTFYNILLCDSVAHTAGELL 264


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -2

Query: 184 TFIDNLYIVIFSIFHYIFGNIIFCYNCSHSSAELL 80
           T I N+ ++ +      F NI+ C + +H++ ELL
Sbjct: 551 TIISNVTVISWQAV-CTFYNILLCDSVAHTAGELL 584


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 20  LLKGSISQNCLHFVP 64
           ++KG++  NC+ FVP
Sbjct: 194 VVKGAMLTNCICFVP 208


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 20  LLKGSISQNCLHFVP 64
           ++KG++  NC+ FVP
Sbjct: 194 VVKGAMLTNCICFVP 208


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 20  LLKGSISQNCLHFVP 64
           ++KG++  NC+ FVP
Sbjct: 194 VVKGAMLTNCICFVP 208


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 20  LLKGSISQNCLHFVP 64
           ++KG++  NC+ FVP
Sbjct: 194 VVKGAMLTNCICFVP 208


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,624
Number of Sequences: 336
Number of extensions: 2209
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)