Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_N08
(860 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U29607-1|AAA82930.1| 478|Homo sapiens methionine aminopeptidase... 81 7e-15
U13261-1|AAC63402.1| 478|Homo sapiens eIF-2-associated p67 homo... 81 7e-15
BC013782-1|AAH13782.1| 478|Homo sapiens methionyl aminopeptidas... 81 7e-15
AK091730-1|BAC03733.1| 455|Homo sapiens protein ( Homo sapiens ... 81 7e-15
U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa su... 31 5.4
BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix... 31 5.4
AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related, matrix... 31 5.4
>U29607-1|AAA82930.1| 478|Homo sapiens methionine aminopeptidase
protein.
Length = 478
Score = 80.6 bits (190), Expect = 7e-15
Identities = 45/111 (40%), Positives = 64/111 (57%)
Frame = +2
Query: 392 QTVPPTIPVAELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEI 571
QT PP++P+ +L+P+G FP+GQ ++ P + D RTA R TSEEK+ALD+ ++I+ +
Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQ--DGRTAAWRTTSEEKKALDQASEEIWNDF 169
Query: 572 RHAAEAHRQTRXPSAXGSSLA*L**IFVKSXRRLXXVLLGEDGLKAGLAXP 724
R AAEAHRQ R + L+ E+GL AGLA P
Sbjct: 170 REAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFP 220
Score = 52.0 bits (119), Expect = 3e-06
Identities = 30/76 (39%), Positives = 38/76 (50%)
Frame = +1
Query: 601 KKXIRNXIKPGMTMIDICEELXKTAXRLIG*RWAQSRSGXXPQXCXRNXCAXHXTPNPG* 780
+K + + IKPGMTMI+ICE+L + +LI + P C N CA H TPN G
Sbjct: 180 RKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLA-FPTGCSLNNCAAHYTPNAG- 237
Query: 781 XHXXPXYDDXXXIXXG 828
YDD I G
Sbjct: 238 DTTVLQYDDICKIDFG 253
>U13261-1|AAC63402.1| 478|Homo sapiens eIF-2-associated p67 homolog
protein.
Length = 478
Score = 80.6 bits (190), Expect = 7e-15
Identities = 45/111 (40%), Positives = 64/111 (57%)
Frame = +2
Query: 392 QTVPPTIPVAELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEI 571
QT PP++P+ +L+P+G FP+GQ ++ P + D RTA R TSEEK+ALD+ ++I+ +
Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQ--DGRTAAWRTTSEEKKALDQASEEIWNDF 169
Query: 572 RHAAEAHRQTRXPSAXGSSLA*L**IFVKSXRRLXXVLLGEDGLKAGLAXP 724
R AAEAHRQ R + L+ E+GL AGLA P
Sbjct: 170 REAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFP 220
Score = 52.0 bits (119), Expect = 3e-06
Identities = 30/76 (39%), Positives = 38/76 (50%)
Frame = +1
Query: 601 KKXIRNXIKPGMTMIDICEELXKTAXRLIG*RWAQSRSGXXPQXCXRNXCAXHXTPNPG* 780
+K + + IKPGMTMI+ICE+L + +LI + P C N CA H TPN G
Sbjct: 180 RKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLA-FPTGCSLNNCAAHYTPNAG- 237
Query: 781 XHXXPXYDDXXXIXXG 828
YDD I G
Sbjct: 238 DTTVLQYDDICKIDFG 253
>BC013782-1|AAH13782.1| 478|Homo sapiens methionyl aminopeptidase 2
protein.
Length = 478
Score = 80.6 bits (190), Expect = 7e-15
Identities = 45/111 (40%), Positives = 64/111 (57%)
Frame = +2
Query: 392 QTVPPTIPVAELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEI 571
QT PP++P+ +L+P+G FP+GQ ++ P + D RTA R TSEEK+ALD+ ++I+ +
Sbjct: 112 QTDPPSVPICDLYPNGVFPKGQECEYPPTQ--DGRTAAWRTTSEEKKALDQASEEIWNDF 169
Query: 572 RHAAEAHRQTRXPSAXGSSLA*L**IFVKSXRRLXXVLLGEDGLKAGLAXP 724
R AAEAHRQ R + L+ E+GL AGLA P
Sbjct: 170 REAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFP 220
Score = 52.0 bits (119), Expect = 3e-06
Identities = 30/76 (39%), Positives = 38/76 (50%)
Frame = +1
Query: 601 KKXIRNXIKPGMTMIDICEELXKTAXRLIG*RWAQSRSGXXPQXCXRNXCAXHXTPNPG* 780
+K + + IKPGMTMI+ICE+L + +LI + P C N CA H TPN G
Sbjct: 180 RKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLA-FPTGCSLNNCAAHYTPNAG- 237
Query: 781 XHXXPXYDDXXXIXXG 828
YDD I G
Sbjct: 238 DTTVLQYDDICKIDFG 253
>AK091730-1|BAC03733.1| 455|Homo sapiens protein ( Homo sapiens
cDNA FLJ34411 fis, clone HEART2002220, highly similar to
METHIONINE AMINOPEPTIDASE 2 (EC 3.4.11.18). ).
Length = 455
Score = 80.6 bits (190), Expect = 7e-15
Identities = 45/111 (40%), Positives = 64/111 (57%)
Frame = +2
Query: 392 QTVPPTIPVAELFPDGNFPEGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEI 571
QT PP++P+ +L+P+G FP+GQ ++ P + D RTA R TSEEK+ALD+ ++I+ +
Sbjct: 89 QTDPPSVPICDLYPNGVFPKGQECEYPPTQ--DGRTAAWRTTSEEKKALDQASEEIWNDF 146
Query: 572 RHAAEAHRQTRXPSAXGSSLA*L**IFVKSXRRLXXVLLGEDGLKAGLAXP 724
R AAEAHRQ R + L+ E+GL AGLA P
Sbjct: 147 REAAEAHRQVRKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLAFP 197
Score = 52.0 bits (119), Expect = 3e-06
Identities = 30/76 (39%), Positives = 38/76 (50%)
Frame = +1
Query: 601 KKXIRNXIKPGMTMIDICEELXKTAXRLIG*RWAQSRSGXXPQXCXRNXCAXHXTPNPG* 780
+K + + IKPGMTMI+ICE+L + +LI + P C N CA H TPN G
Sbjct: 157 RKYVMSWIKPGMTMIEICEKLEDCSRKLIKENGLNAGLA-FPTGCSLNNCAAHYTPNAG- 214
Query: 781 XHXXPXYDDXXXIXXG 828
YDD I G
Sbjct: 215 DTTVLQYDDICKIDFG 230
>U66617-1|AAC50695.1| 435|Homo sapiens SWI/SNF complex 60 KDa
subunit protein.
Length = 435
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +2
Query: 449 EGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRXPSAXG 622
EG++++ D K +F+S K + L KD+Y H E HR G
Sbjct: 173 EGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDG 230
>BC009368-1|AAH09368.3| 476|Homo sapiens SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, sub
protein.
Length = 476
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +2
Query: 449 EGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRXPSAXG 622
EG++++ D K +F+S K + L KD+Y H E HR G
Sbjct: 173 EGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDG 230
>AF109733-1|AAD23390.1| 453|Homo sapiens SWI/SNF-related,
matrix-associated, actin-dependent regulator of
chromatin D1 protein.
Length = 453
Score = 31.1 bits (67), Expect = 5.4
Identities = 16/58 (27%), Positives = 24/58 (41%)
Frame = +2
Query: 449 EGQIMDHGPAEGIDERTAKNRFTSEEKRALDRLHKDIYQEIRHAAEAHRQTRXPSAXG 622
EG++++ D K +F+S K + L KD+Y H E HR G
Sbjct: 150 EGRLLEDSALSKYDATKQKRKFSSFFKSLVIELDKDLYGPDNHLVEWHRTATTQETDG 207
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,094,773
Number of Sequences: 237096
Number of extensions: 1365671
Number of successful extensions: 2316
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 2228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2304
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -