Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N07
         (857 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_40801| Best HMM Match : Complex1_51K (HMM E-Value=0)               289   2e-78
SB_44387| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)              30   2.8  
SB_48945| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)              30   2.8  
SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)              30   2.8  
SB_25869| Best HMM Match : Ank (HMM E-Value=1.54143e-44)               29   4.8  
SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)                 29   6.4  
SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013)                  29   6.4  
SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013)                  29   6.4  
SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   8.5  

>SB_40801| Best HMM Match : Complex1_51K (HMM E-Value=0)
          Length = 369

 Score =  289 bits (709), Expect = 2e-78
 Identities = 125/148 (84%), Positives = 138/148 (93%)
 Frame = +1

Query: 250 GDWYLTKEILLKGTDWIVNEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADE 429
           GDWY TKEI+LKG DWI+ E+ TSGLRGRGGAGFPTGMKW FMNKPSDGRPKYLVVNADE
Sbjct: 1   GDWYKTKEIILKGPDWILKEITTSGLRGRGGAGFPTGMKWGFMNKPSDGRPKYLVVNADE 60

Query: 430 GEPGTCKDREIMRHDPHKLVEGCLIAGRAMGAQAAYIYIRGEFYNEASNLQVAIAEAYXX 609
           GEPGTCKDREIMR+DPHKL+EGCL+AG +MGA+AAYIYIRGEFYNEASN+QVAI EAY  
Sbjct: 61  GEPGTCKDREIMRNDPHKLIEGCLVAGASMGARAAYIYIRGEFYNEASNMQVAINEAYKK 120

Query: 610 GLIGKNSCGSGYDFDIXVHRGAGAYICG 693
           GLIGKN+CGSG+DFD+ +HRGAGAYICG
Sbjct: 121 GLIGKNACGSGFDFDVYMHRGAGAYICG 148


>SB_44387| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)
          Length = 160

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 31  RNMAGALTRVIQGTKPHLGIIGPLAINVNNVPVR 132
           R MA ++  +++  + H G+IG + +N    P+R
Sbjct: 62  RPMASSVENILKRIQSHKGVIGSIVVNSEGTPIR 95


>SB_48945| Best HMM Match : Robl_LC7 (HMM E-Value=5.4e-23)
          Length = 101

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 10/34 (29%), Positives = 20/34 (58%)
 Frame = +1

Query: 31  RNMAGALTRVIQGTKPHLGIIGPLAINVNNVPVR 132
           R MA ++  +++  + H G+IG + +N    P+R
Sbjct: 3   RPMASSVENILKRIQSHKGVIGSIVVNSEGTPIR 36


>SB_19567| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1383

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 30/117 (25%), Positives = 42/117 (35%)
 Frame = +1

Query: 124  PVRFQQTQAPSKDKYGPLADSDRVFTNLYGRHEWRLKGALARGDWYLTKEILLKGTDWIV 303
            PVR  +   P   K  P+  +     +  G H       +   D Y  KE+LL   D  +
Sbjct: 824  PVRDARID-PLVGKVSPMIKTKESKPSKQGMHFQERSTVVQMPDNYSCKEVLL---DEDL 879

Query: 304  NEMKTSGLRGRGGAGFPTGMKWSFMNKPSDGRPKYLVVNADEGEPGTCKDREIMRHD 474
            N+ K +         F  G    + + P D   KYL  N    EP    D +   HD
Sbjct: 880  NKSKVTCKLDGLDEQFDKGSAIDYSHAPKDADEKYLKKNVLRDEPVRDTDSDTEGHD 936


>SB_25869| Best HMM Match : Ank (HMM E-Value=1.54143e-44)
          Length = 712

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = +1

Query: 577 LQVAIAEAYXXGLIGKNSCGSGYDFDIXVHRGAGAYICGEETALIXSI 720
           L V I  A+   L    +C   YD     ++G G  +C  E+  I SI
Sbjct: 430 LYVVIYAAFILNLSNSMTCFRNYDLTTGEYKGTGGSMCTPESLQIQSI 477


>SB_7202| Best HMM Match : UQ_con (HMM E-Value=5.9e-05)
          Length = 200

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 14/47 (29%), Positives = 22/47 (46%)
 Frame = -1

Query: 437 GSPSSAFTTRYFGRPSDGLFMNDHFIPVGKPAPPLPRRPDVFISLTI 297
           G P++ F  RY  + +  +F     +    P P LP  PD +  +TI
Sbjct: 18  GGPAAIFVCRYRVQHNKTVFKTQVILTGWNPVPWLPEPPDFYRPVTI 64


>SB_43858| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
          Length = 517

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 527 CAPMARPAIRHPSTSLW 477
           C PM RP  RH +T++W
Sbjct: 463 CPPMKRPVTRHQATAVW 479


>SB_35100| Best HMM Match : TPR_2 (HMM E-Value=0.0013)
          Length = 158

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -1

Query: 527 CAPMARPAIRHPSTSLW 477
           C PM RP  RH +T++W
Sbjct: 104 CPPMKRPVTRHQATAVW 120


>SB_6162| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1808

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 10/45 (22%), Positives = 22/45 (48%)
 Frame = +2

Query: 449  KTGRLCVTTPTNWWKDV*LLAEPWVHKQHTFTSEVNSTMKQAICK 583
            K  +L  + P+ WWK++  L+    +  H ++     +  Q +C+
Sbjct: 1255 KVAKLKESNPSRWWKEIKKLSGASCNDNHWYSQLATGSSVQELCE 1299


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,241,915
Number of Sequences: 59808
Number of extensions: 663833
Number of successful extensions: 1787
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1787
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2443309836
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)