Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N06
         (840 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1 ...    24   1.7  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   5.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.2  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   9.2  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.2  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    21   9.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.2  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.2  

>AJ223627-1|CAA11500.1|  371|Tribolium castaneum orthodenticle-1
           protein protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 8/40 (20%), Positives = 17/40 (42%)
 Frame = +1

Query: 601 IWPPGGAAGATSLCFVYPLDFARTVSPPMSVRAMASVNPP 720
           +WPP         C    +++ +  S P+ +  + +  PP
Sbjct: 1   MWPPEAVHSLERFCTYGNVNYRQRRSQPLKISCLKTTPPP 40


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 174 VIPHPRVPQLPPRHIHL 224
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 174 VIPHPRVPQLPPRHIHL 224
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 174 VIPHPRVPQLPPRHIHL 224
           VIP    P++ P H+H+
Sbjct: 198 VIPPENGPKMTPNHLHI 214


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 711 HAGHRPYRHRRRDGTC 664
           HAG +P++  + D TC
Sbjct: 253 HAGSKPFQCNKCDYTC 268


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 711 HAGHRPYRHRRRDGTC 664
           HAG +P++  + D TC
Sbjct: 11  HAGSKPFQCNKCDYTC 26


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +3

Query: 783 FXCVRARYHHLPC 821
           + C   R HH+PC
Sbjct: 935 YMCEGERKHHMPC 947


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 682 AARRYVRSRGGTRSTERWLRRH 617
           AARR   +R  T + + WL  H
Sbjct: 85  AARRKNATRESTATLKAWLNEH 106


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 177 IPHPRVPQLPP 209
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 9.2
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 177 IPHPRVPQLPP 209
           +P P VP++PP
Sbjct: 206 VPKPTVPKIPP 216


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,018
Number of Sequences: 336
Number of extensions: 4201
Number of successful extensions: 19
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23140487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)