BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_N05 (909 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29) 69 5e-12 SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 50 3e-06 SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17) 40 0.002 SB_40119| Best HMM Match : PA (HMM E-Value=4.3e-14) 29 3.9 >SB_51535| Best HMM Match : W2 (HMM E-Value=4e-29) Length = 770 Score = 68.9 bits (161), Expect = 5e-12 Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 1/72 (1%) Frame = +3 Query: 276 DVP-DGDAKYDIIFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALX 452 D P D ++++ + ILNKLTP+KF K +LKGVILL+FEKAL Sbjct: 25 DFPRDERTEFEVYEVTLYSILNKLTPDKFDKLFYELLHVGVETKYILKGVILLVFEKALD 84 Query: 453 EPKYSSMYAQLC 488 EP YSSMYAQLC Sbjct: 85 EPAYSSMYAQLC 96 Score = 29.9 bits (64), Expect = 3.0 Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%) Frame = +1 Query: 493 RLXEEAPNFEPPGSXVH-I*XLLLLNKCXXEF 585 RL EEAPNF+ PG + LLL +C EF Sbjct: 98 RLSEEAPNFDDPGKTGNSTFRRLLLKQCEEEF 129 >SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) Length = 1265 Score = 49.6 bits (113), Expect = 3e-06 Identities = 23/56 (41%), Positives = 35/56 (62%) Frame = +3 Query: 276 DVPDGDAKYDIIFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEK 443 ++P+ ++K + + RK RGILNKLTP+KF+K L+G+I +IFEK Sbjct: 754 ELPEEESKTEEVMRKFRGILNKLTPQKFKKLTEQVMELEIDTSEKLEGIIDIIFEK 809 >SB_32308| Best HMM Match : MIF4G (HMM E-Value=1.5e-17) Length = 605 Score = 40.3 bits (90), Expect = 0.002 Identities = 18/45 (40%), Positives = 26/45 (57%) Frame = +3 Query: 309 IFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEK 443 + RK RGILNK+TP+ F+K L+G+I ++FEK Sbjct: 410 VMRKFRGILNKITPQNFKKLVEQVMNLEIDTAEKLEGIIDIVFEK 454 >SB_40119| Best HMM Match : PA (HMM E-Value=4.3e-14) Length = 328 Score = 29.5 bits (63), Expect = 3.9 Identities = 22/82 (26%), Positives = 31/82 (37%) Frame = -2 Query: 443 FLKNEKDDALEDPVGVQFEPEEIIAQLLKFLRRELVENTTNLAEYDVVLGISVGHVVMSE 264 F + E + L D +GV + I + K R + V N ++ S E Sbjct: 105 FGRVEDFERLRDELGVVIQGRIAIMRYGKIFRGDKVANAARFGAKGAII-FSDPQQYAPE 163 Query: 263 **GRDPASPRGDWRPPRGDARG 198 D P G+W PP G RG Sbjct: 164 GTTPDKVYPNGEWLPPTGVQRG 185 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,447,895 Number of Sequences: 59808 Number of extensions: 258024 Number of successful extensions: 620 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 564 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 617 length of database: 16,821,457 effective HSP length: 82 effective length of database: 11,917,201 effective search space used: 2621784220 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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