BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= FWDP01_FL5_N05 (909 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At5g57870.2 68418.m07239 eukaryotic translation initiation facto... 61 9e-10 At5g57870.1 68418.m07238 eukaryotic translation initiation facto... 61 9e-10 At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3 d... 56 3e-08 At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 d... 52 5e-07 At1g62410.1 68414.m07041 MIF4G domain-containing protein similar... 33 0.20 At1g05630.1 68414.m00584 endonuclease/exonuclease/phosphatase fa... 31 1.1 At5g18070.1 68418.m02120 phosphoglucosamine mutase-related simil... 28 9.8 >At5g57870.2 68418.m07239 eukaryotic translation initiation factor 4F, putative / eIF-4F, putative similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain Length = 776 Score = 61.3 bits (142), Expect = 9e-10 Identities = 29/62 (46%), Positives = 38/62 (61%) Frame = +3 Query: 303 DIIFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALXEPKYSSMYAQ 482 D + + V+GILNKLTPEK+ +LKGVI LIF+KA+ EP + MYA+ Sbjct: 209 DRVLKTVKGILNKLTPEKYDLLKGQLIESGITSADILKGVITLIFDKAVLEPTFCPMYAK 268 Query: 483 LC 488 LC Sbjct: 269 LC 270 >At5g57870.1 68418.m07238 eukaryotic translation initiation factor 4F, putative / eIF-4F, putative similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain Length = 780 Score = 61.3 bits (142), Expect = 9e-10 Identities = 29/62 (46%), Positives = 38/62 (61%) Frame = +3 Query: 303 DIIFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALXEPKYSSMYAQ 482 D + + V+GILNKLTPEK+ +LKGVI LIF+KA+ EP + MYA+ Sbjct: 213 DRVLKTVKGILNKLTPEKYDLLKGQLIESGITSADILKGVITLIFDKAVLEPTFCPMYAK 272 Query: 483 LC 488 LC Sbjct: 273 LC 274 >At2g24050.1 68415.m02873 MIF4G domain-containing protein / MA3 domain-containing protein similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain Length = 747 Score = 56.0 bits (129), Expect = 3e-08 Identities = 27/62 (43%), Positives = 36/62 (58%) Frame = +3 Query: 303 DIIFRKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALXEPKYSSMYAQ 482 D + + V+GILNKLTPEK++ +LK VI LIFE A+ +P + MYA Sbjct: 172 DRVVKSVKGILNKLTPEKYELLKGQLIDAGITSADILKEVIQLIFENAILQPTFCEMYAL 231 Query: 483 LC 488 LC Sbjct: 232 LC 233 >At3g60240.1 68416.m06732 MIF4G domain-containing protein / MA3 domain-containing protein similar to eukaryotic protein synthesis initiation factor [Homo sapiens] GI:3941724; contains Pfam profiles PF02854: MIF4G domain, PF02847: MA3 domain Length = 1544 Score = 52.0 bits (119), Expect = 5e-07 Identities = 25/58 (43%), Positives = 32/58 (55%) Frame = +3 Query: 315 RKVRGILNKLTPEKFQKXXXXXXXXXXXXXRVLKGVILLIFEKALXEPKYSSMYAQLC 488 R+++ ILNKLTP+ F+K L GVI IF+KAL EP + MYA C Sbjct: 914 RQLKSILNKLTPQNFEKLFEQVKSVNIDNAVTLSGVISQIFDKALMEPTFCEMYADFC 971 >At1g62410.1 68414.m07041 MIF4G domain-containing protein similar to SP|Q03387 Eukaryotic initiation factor (iso)4F subunit P82-34 (eIF-(iso)4F P82-34) {Triticum aestivum}; contains Pfam profile PF02854: MIF4G domain Length = 223 Score = 33.5 bits (73), Expect = 0.20 Identities = 14/26 (53%), Positives = 19/26 (73%) Frame = +3 Query: 411 LKGVILLIFEKALXEPKYSSMYAQLC 488 L+ + LIF+KA+ EP + MYAQLC Sbjct: 10 LQRLTTLIFDKAVLEPTFCPMYAQLC 35 >At1g05630.1 68414.m00584 endonuclease/exonuclease/phosphatase family protein similar to inositol 1,4,5-trisphosphate 5-phosphatase (GI:4688596) [Arabidopsis thaliana] Length = 861 Score = 31.1 bits (67), Expect = 1.1 Identities = 12/23 (52%), Positives = 14/23 (60%) Frame = +1 Query: 220 GRQSPRGDAGSRPHHSDITTCPT 288 G Q PRGD + P H +TT PT Sbjct: 188 GGQVPRGDEDTAPFHESVTTSPT 210 >At5g18070.1 68418.m02120 phosphoglucosamine mutase-related similar to SP|Q9P4V2 Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) {Candida albicans}; contains Pfam profiles PF00408: Phosphoglucomutase/phosphomannomutase C-terminal domain, PF02878: Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I Length = 556 Score = 27.9 bits (59), Expect = 9.8 Identities = 13/51 (25%), Positives = 27/51 (52%) Frame = -2 Query: 446 GFLKNEKDDALEDPVGVQFEPEEIIAQLLKFLRRELVENTTNLAEYDVVLG 294 GF+ +++ + D + PEE+++ + KF+ +E + N +V LG Sbjct: 84 GFMLSQEWEPFADQIANASSPEELVSLIRKFMEKEEIAIGENNKGAEVWLG 134 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,658,009 Number of Sequences: 28952 Number of extensions: 180250 Number of successful extensions: 436 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 426 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 432 length of database: 12,070,560 effective HSP length: 81 effective length of database: 9,725,448 effective search space used: 2149324008 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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