Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N04
         (851 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         31   1.5  
07_03_0579 + 19649978-19650442                                         29   4.7  
07_03_0568 - 19593265-19593729                                         29   4.7  
08_02_1319 + 26117353-26117784                                         29   6.2  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 30.7 bits (66), Expect = 1.5
 Identities = 22/73 (30%), Positives = 29/73 (39%)
 Frame = +1

Query: 328 RSLPRRKAHPLPG*KRKSPTP*KCTFPNPTPXVKHVPYPV*RDCQGTSSRTATLPSRKEG 507
           +S P  +  P P    KSP P +    +P P  K  P P       T  ++ + PS  EG
Sbjct: 772 KSSPPEEKSPPPHSPEKSP-PSEAHPTSPPPSEKSPPTPAEESSPPTPEKSPSPPSGHEG 830

Query: 508 ALPSTCPSRQTRP 546
             PS   S    P
Sbjct: 831 TPPSPVKSSSPPP 843


>07_03_0579 + 19649978-19650442
          Length = 154

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 451 RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFM 597
           RD    + R A    + +G  P+  P+    PR     ++LPRLK + +
Sbjct: 91  RDDPFRAVRVAVKDVKLQGPRPAPTPANMAAPRPTTAGKSLPRLKMQML 139


>07_03_0568 - 19593265-19593729
          Length = 154

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 451 RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFM 597
           RD    + R A    + +G  P+  P+    PR     ++LPRLK + +
Sbjct: 91  RDDPFRAVRVAVKDVKLQGPRPAPTPANMAAPRPTTAGKSLPRLKMQML 139


>08_02_1319 + 26117353-26117784
          Length = 143

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = +1

Query: 460 QGTSSRTATLPSRKEGALPSTCPSRQTRPRQGICARTL 573
           +GTS     L ++ +   P TCP++  RP     +RT+
Sbjct: 87  RGTSKPDKYLKAKSDSVRPRTCPAKSGRPPGASSSRTV 124


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,702,360
Number of Sequences: 37544
Number of extensions: 348624
Number of successful extensions: 1166
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1131
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)