Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_N04
         (851 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    33   0.015
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            25   3.9  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.1  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.9  

>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 32.7 bits (71), Expect = 0.015
 Identities = 15/46 (32%), Positives = 21/46 (45%)
 Frame = +2

Query: 650 LPRKGSVHVPAPYPXIQRGTSTXKVHVDRPYPXHIPKPVPYPSRXP 787
           +P    V++P PYP         K+ + +  P  I KPVPY    P
Sbjct: 186 VPHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKP 231



 Score = 28.3 bits (60), Expect = 0.31
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +3

Query: 378 IPYPVKVHVPQPYP 419
           +P+ VKV++PQPYP
Sbjct: 186 VPHYVKVYIPQPYP 199



 Score = 23.4 bits (48), Expect = 8.9
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +2

Query: 728 VDRPYPXHIPKPVP 769
           V++PYP  + KP P
Sbjct: 228 VEKPYPIEVEKPFP 241


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 24.6 bits (51), Expect = 3.9
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 562 HIYLDGDGSVDWDMYWVRHLLFDWV 488
           +I+L  DGS+ W    VR LLF+ V
Sbjct: 78  NIFLKTDGSLLWKNKPVRELLFEGV 102


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = +2

Query: 704 GTSTXKVHVDRPYPXHIPKPVPYPSRXP 787
           G +   V +  PYP  IP P+P P   P
Sbjct: 620 GGAAPPVTILVPYPIIIPLPLPIPVPIP 647


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 490 PSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFMFQS 606
           P+R+     ST P+   R R     + LPR +R F F S
Sbjct: 275 PARRRSR--STRPTSWPRSRPTSKPKRLPRRRRPFFFSS 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 654,378
Number of Sequences: 2352
Number of extensions: 11119
Number of successful extensions: 85
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 85
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)