Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_N04
(851 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001463-1|AAH01463.2| 137|Homo sapiens SCOTIN protein protein. 32 3.0
AK075441-1|BAC11623.1| 240|Homo sapiens protein ( Homo sapiens ... 32 3.0
AK056328-1|BAB71152.1| 209|Homo sapiens protein ( Homo sapiens ... 32 3.0
AF520698-1|AAM74232.1| 240|Homo sapiens scotin protein. 32 3.0
AB097007-1|BAC77360.1| 137|Homo sapiens putative NFkB activatin... 32 3.0
AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-ri... 31 5.3
AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-ri... 31 5.3
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 9.3
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 9.3
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 9.3
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 9.3
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 9.3
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 9.3
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 9.3
>BC001463-1|AAH01463.2| 137|Homo sapiens SCOTIN protein protein.
Length = 137
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 683 PYPXIQRGTSTXKVHVDRPYPXHIPKPVPYPSRXPSHT 796
P P + TST VH P P +P P PS HT
Sbjct: 39 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHT 76
>AK075441-1|BAC11623.1| 240|Homo sapiens protein ( Homo sapiens
cDNA PSEC0133 fis, clone PLACE1004507. ).
Length = 240
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 683 PYPXIQRGTSTXKVHVDRPYPXHIPKPVPYPSRXPSHT 796
P P + TST VH P P +P P PS HT
Sbjct: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHT 179
>AK056328-1|BAB71152.1| 209|Homo sapiens protein ( Homo sapiens
cDNA FLJ31766 fis, clone NT2RI2007879, weakly similar to
HOMEOBOX PROTEIN HOX-A4. ).
Length = 209
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 683 PYPXIQRGTSTXKVHVDRPYPXHIPKPVPYPSRXPSHT 796
P P + TST VH P P +P P PS HT
Sbjct: 111 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHT 148
>AF520698-1|AAM74232.1| 240|Homo sapiens scotin protein.
Length = 240
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 683 PYPXIQRGTSTXKVHVDRPYPXHIPKPVPYPSRXPSHT 796
P P + TST VH P P +P P PS HT
Sbjct: 142 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHT 179
>AB097007-1|BAC77360.1| 137|Homo sapiens putative NFkB activating
protein protein.
Length = 137
Score = 31.9 bits (69), Expect = 3.0
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = +2
Query: 683 PYPXIQRGTSTXKVHVDRPYPXHIPKPVPYPSRXPSHT 796
P P + TST VH P P +P P PS HT
Sbjct: 39 PRPVVTTTTSTTVVHAPYPQPPSVPPSYPGPSYQGYHT 76
>AY960854-1|AAX59055.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 650 LPRKGSVHVPAPYPXIQRGTSTXKVHVDRPYPXHIPKPVPYPSRXPS 790
LPR G +P P P +Q + P P P+P+P P+ PS
Sbjct: 449 LPRPGQCEIPEPRPCLQP--------CEHPEPCPRPEPIPLPAPCPS 487
>AL353779-4|CAI20978.1| 579|Homo sapiens keratinocyte proline-rich
protein protein.
Length = 579
Score = 31.1 bits (67), Expect = 5.3
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 650 LPRKGSVHVPAPYPXIQRGTSTXKVHVDRPYPXHIPKPVPYPSRXPS 790
LPR G +P P P +Q + P P P+P+P P+ PS
Sbjct: 449 LPRPGQCEIPEPRPCLQP--------CEHPEPCPRPEPIPLPAPCPS 487
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 9.3
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +1
Query: 340 RRKAHPLPG*KRKS----PTP*KCTFPNPTPX--VKHVPYPV*RDCQGTSSRTATLPSR- 498
+R+ P P KR++ P P + P+P P V H P P R T R+ +L S+
Sbjct: 601 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 660
Query: 499 KEGALP--STCPSRQTRPRQGICARTLPR 579
++G+ P ST +R +P + PR
Sbjct: 661 RKGSSPSRSTREARSPQPNKRHSPSPRPR 689
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 9.3
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +1
Query: 340 RRKAHPLPG*KRKS----PTP*KCTFPNPTPX--VKHVPYPV*RDCQGTSSRTATLPSR- 498
+R+ P P KR++ P P + P+P P V H P P R T R+ +L S+
Sbjct: 601 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 660
Query: 499 KEGALP--STCPSRQTRPRQGICARTLPR 579
++G+ P ST +R +P + PR
Sbjct: 661 RKGSSPSRSTREARSPQPNKRHSPSPRPR 689
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.3 bits (65), Expect = 9.3
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +1
Query: 340 RRKAHPLPG*KRKS----PTP*KCTFPNPTPX--VKHVPYPV*RDCQGTSSRTATLPSR- 498
+R+ P P KR++ P P + P+P P V H P P R T R+ +L S+
Sbjct: 610 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 669
Query: 499 KEGALP--STCPSRQTRPRQGICARTLPR 579
++G+ P ST +R +P + PR
Sbjct: 670 RKGSSPSRSTREARSPQPNKRHSPSPRPR 698
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 9.3
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +1
Query: 340 RRKAHPLPG*KRKS----PTP*KCTFPNPTPX--VKHVPYPV*RDCQGTSSRTATLPSR- 498
+R+ P P KR++ P P + P+P P V H P P R T R+ +L S+
Sbjct: 601 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 660
Query: 499 KEGALP--STCPSRQTRPRQGICARTLPR 579
++G+ P ST +R +P + PR
Sbjct: 661 RKGSSPSRSTREARSPQPNKRHSPSPRPR 689
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.3 bits (65), Expect = 9.3
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +1
Query: 340 RRKAHPLPG*KRKS----PTP*KCTFPNPTPX--VKHVPYPV*RDCQGTSSRTATLPSR- 498
+R+ P P KR++ P P + P+P P V H P P R T R+ +L S+
Sbjct: 610 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 669
Query: 499 KEGALP--STCPSRQTRPRQGICARTLPR 579
++G+ P ST +R +P + PR
Sbjct: 670 RKGSSPSRSTREARSPQPNKRHSPSPRPR 698
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.3 bits (65), Expect = 9.3
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +1
Query: 340 RRKAHPLPG*KRKS----PTP*KCTFPNPTPX--VKHVPYPV*RDCQGTSSRTATLPSR- 498
+R+ P P KR++ P P + P+P P V H P P R T R+ +L S+
Sbjct: 599 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 658
Query: 499 KEGALP--STCPSRQTRPRQGICARTLPR 579
++G+ P ST +R +P + PR
Sbjct: 659 RKGSSPSRSTREARSPQPNKRHSPSPRPR 687
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.3 bits (65), Expect = 9.3
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Frame = +1
Query: 340 RRKAHPLPG*KRKS----PTP*KCTFPNPTPX--VKHVPYPV*RDCQGTSSRTATLPSR- 498
+R+ P P KR++ P P + P+P P V H P P R T R+ +L S+
Sbjct: 599 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 658
Query: 499 KEGALP--STCPSRQTRPRQGICARTLPR 579
++G+ P ST +R +P + PR
Sbjct: 659 RKGSSPSRSTREARSPQPNKRHSPSPRPR 687
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,639,966
Number of Sequences: 237096
Number of extensions: 1860303
Number of successful extensions: 5120
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4473
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5028
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10816958492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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