Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_M21
(861 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 300 1e-82
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 164 2e-41
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 153 4e-38
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 120 2e-28
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 94 2e-20
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 89 1e-18
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 83 5e-17
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 43 5e-05
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 34 0.023
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 32 0.12
SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr... 31 0.21
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 30 0.49
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 28 1.5
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam... 28 2.0
SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|ch... 28 2.0
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 27 2.6
SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual 27 3.4
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.5
SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence orphan|Schizos... 27 4.5
SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces p... 26 6.0
SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual 26 7.9
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 7.9
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 300 bits (737), Expect = 1e-82
Identities = 136/147 (92%), Positives = 142/147 (96%)
Frame = +2
Query: 173 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 352
+EE+AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRH G+MVGMGQKDSYVGDEAQSK
Sbjct: 2 EEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHHGIMVGMGQKDSYVGDEAQSK 61
Query: 353 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 532
RGILTLKYPIEHGIV NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPK+NREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPCLLTEAPLNPKSNREKMTQ 121
Query: 533 IMFETFNTPAMYVAIQAVLSLYASGRT 613
I+FETFN PA YVAIQAVLSLYASGRT
Sbjct: 122 IIFETFNAPAFYVAIQAVLSLYASGRT 148
Score = 83.8 bits (198), Expect = 3e-17
Identities = 39/51 (76%), Positives = 41/51 (80%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
TGIVLDSGDGV+HTVPIYEGYALP AI D G DL DYLM IL ERGY+
Sbjct: 149 TGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILMERGYT 199
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 164 bits (398), Expect = 2e-41
Identities = 74/142 (52%), Positives = 101/142 (71%), Gaps = 1/142 (0%)
Frame = +2
Query: 191 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 370
+ +DNGSG KAGFAGDD P+ +FP+ VGR +H+ VM QKD +VG EAQ+ RG+L +
Sbjct: 12 ICIDNGSGFIKAGFAGDDIPKCLFPTCVGRIKHERVMPSSIQKDMFVGSEAQNLRGLLKI 71
Query: 371 KYPIEHGIVTNWDDMEKIWHHTFYN-ELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 547
+ PIE GI+ NW DME+IW + + + +L PEEHP+LLTE PL N+EK+ + +ET
Sbjct: 72 QRPIERGIIQNWSDMEEIWSYIYSDQQLNTLPEEHPLLLTEPPLANIRNKEKIAEYFYET 131
Query: 548 FNTPAMYVAIQAVLSLYASGRT 613
N PA+ ++Q VL+LYAS RT
Sbjct: 132 LNVPALSFSLQPVLALYASART 153
Score = 59.7 bits (138), Expect = 5e-10
Identities = 28/62 (45%), Positives = 41/62 (66%)
Frame = +1
Query: 577 PSRALAVRVRSYTGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTER 756
P AL R+ TGIVL+ GDG++H+VPIY+G+++P AI + G D+ DYL L +
Sbjct: 143 PVLALYASART-TGIVLECGDGLTHSVPIYDGFSIPSAIQQEEIGGRDVTDYLQLQLRKS 201
Query: 757 GY 762
G+
Sbjct: 202 GH 203
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 153 bits (370), Expect = 4e-38
Identities = 72/145 (49%), Positives = 102/145 (70%), Gaps = 2/145 (1%)
Frame = +2
Query: 179 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSK 352
E A +V+DNG+G K G+A D+ PR FPSIVGRP R + + KD VGDEA++
Sbjct: 2 ESAPIVLDNGTGFVKVGYAKDNFPRFQFPSIVGRPILRAEEKTGNVQIKDVMVGDEAEAV 61
Query: 353 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 532
R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P+NP ANREKM +
Sbjct: 62 RSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPPMNPVANREKMCE 121
Query: 533 IMFETFNTPAMYVAIQAVLSLYASG 607
MFE + +YVAIQAVLSLYA G
Sbjct: 122 TMFERYGFGGVYVAIQAVLSLYAQG 146
Score = 53.6 bits (123), Expect = 3e-08
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
+G+V+DSGDGV+H VP+YE L + D G D YL+ +L +GY+
Sbjct: 149 SGVVVDSGDGVTHIVPVYESVVLNHLVGRLDVAGRDATRYLISLLLRKGYA 199
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 120 bits (290), Expect = 2e-28
Identities = 66/162 (40%), Positives = 91/162 (56%), Gaps = 24/162 (14%)
Frame = +2
Query: 191 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG---------MGQK-------- 319
+++DNG+G K G+AG+DAP VFP+++ R G G M K
Sbjct: 8 IIMDNGTGYSKLGYAGNDAPSYVFPTVIAT-RSAGASSGPAVSSKPSYMASKGSGHLSSK 66
Query: 320 ------DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPV 478
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H
Sbjct: 67 RATEDLDFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYF 126
Query: 479 LLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYAS 604
LLTE PLNP NRE +IMFE+FN +Y+A+QAVL+L AS
Sbjct: 127 LLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAAS 168
Score = 49.6 bits (113), Expect = 6e-07
Identities = 21/51 (41%), Positives = 32/51 (62%)
Frame = +1
Query: 604 RSYTGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTER 756
RS TG V+DSGDGV+H +P+ EGY + +I G D+ ++ +L +R
Sbjct: 177 RSLTGTVVDSGDGVTHIIPVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDR 227
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 94.3 bits (224), Expect = 2e-20
Identities = 52/145 (35%), Positives = 79/145 (54%)
Frame = +2
Query: 176 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 355
+EV+A+V+D GS + GF+G+D P+ V PS G + G + Y+ +S
Sbjct: 9 DEVSAIVIDPGSKWTRIGFSGEDIPKCVLPSYCGEFSDGRRLFG----EEYI---YKSNP 61
Query: 356 GILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 535
G + +K I +G V NWD +W + +L+ P EHP+L+TE NP NR K +
Sbjct: 62 G-MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENRVKTLET 120
Query: 536 MFETFNTPAMYVAIQAVLSLYASGR 610
MFE+ PA Y+A Q + +ASG+
Sbjct: 121 MFESLRCPATYLAKQETCAAFASGK 145
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 88.6 bits (210), Expect = 1e-18
Identities = 45/137 (32%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
Frame = +2
Query: 191 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 370
LV+DNGS +AG+ G+ P+ VF ++V R R + + + + VG++ + G ++
Sbjct: 27 LVIDNGSWQLRAGWGGEKDPKLVFDNLVSRYRDRK----LSRTSTLVGNDTLIEVGSRSI 82
Query: 371 -KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 547
+ P E +++NWD ME++ +TF +L + EHP+ +TE NP R MT+++FE
Sbjct: 83 ARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICMTEPLANPTYVRSTMTELLFEL 141
Query: 548 FNTPAMYVAIQAVLSLY 598
+N P++ I + S Y
Sbjct: 142 YNAPSVAYGIDGLFSFY 158
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +1
Query: 607 SYTGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXI 744
S +GIVL+ G+ SH +P+ G + G YL+ +
Sbjct: 164 SSSGIVLNLGNAASHVIPVLNGERILSEAKRISWGGSQSSSYLLKL 209
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 83.0 bits (196), Expect = 5e-17
Identities = 44/148 (29%), Positives = 81/148 (54%), Gaps = 2/148 (1%)
Frame = +2
Query: 176 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR 355
EE+ +LV+D GS + G+AG+++P + PS + GV + ++ YV DE Q
Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHA 61
Query: 356 GI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT 529
I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++
Sbjct: 62 PIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIM 121
Query: 530 QIMFETFNTPAMYVAIQAVLSLYASGRT 613
+ FE + PA Y+ QAV +A+ ++
Sbjct: 122 EAAFEQLHVPAFYLTKQAVCVAFANSKS 149
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 43.2 bits (97), Expect = 5e-05
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 4/81 (4%)
Frame = +2
Query: 377 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEE----HPVLLTEAPLNPKANREKMTQIMFE 544
PI+ G V +W+ ++ W H Y+ L P + +PV L +RE TQ FE
Sbjct: 113 PIQRGRVVDWEALKAFWKH-LYSLLLKDPNDTTFRYPVCLVIPTYWSLYDRELATQFFFE 171
Query: 545 TFNTPAMYVAIQAVLSLYASG 607
P +A + ++ LYA G
Sbjct: 172 ECQVPGFTIAYEPLMGLYAIG 192
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 34.3 bits (75), Expect = 0.023
Identities = 31/128 (24%), Positives = 55/128 (42%), Gaps = 4/128 (3%)
Frame = +2
Query: 191 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTL 370
+V+DNG+ KAGFAG P+ + R + G + ++G+E + TL
Sbjct: 8 IVLDNGAYHIKAGFAGGKV--VEIPNCLTRSKD-------GNR-LFLGNELANCNDFTTL 57
Query: 371 KYPIEH--GIVTNWDDMEKIWHHTFYNELRVAPE--EHPVLLTEAPLNPKANREKMTQIM 538
++ H G + +W +W N + P ++ +LLT+ + Q++
Sbjct: 58 QFRRAHEKGYLVHWSTETAVWDLVMRNVGVMEPSMADYSLLLTQPVFTMPSIEHNTIQLV 117
Query: 539 FETFNTPA 562
FE F A
Sbjct: 118 FEEFQFDA 125
Score = 32.3 bits (70), Expect = 0.091
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +1
Query: 619 IVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
+V+DSG +H +P+ + A+ D G L +YL +++ R Y+
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYN 207
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 31.9 bits (69), Expect = 0.12
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Frame = +2
Query: 437 FYNELRVAPEEHPVLLTE--APLNPKANREKMTQIMFETFNTPAM---YVAIQ 580
+Y L E+HP+LLT+ A L P+ + ++ +I ++ NTP + VAIQ
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTPLILNFMVAIQ 1451
>SPAC56F8.02 |||AMP binding enzyme |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1517
Score = 31.1 bits (67), Expect = 0.21
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 236 GDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYP 379
G+ PRA F ++ P H G+++ M KD G+E S +G + + P
Sbjct: 502 GNQNPRATFVPLLCLPEHGGMVISM--KDWIGGEEFMSPKGFKSPRTP 547
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 29.9 bits (64), Expect = 0.49
Identities = 19/55 (34%), Positives = 23/55 (41%), Gaps = 1/55 (1%)
Frame = -1
Query: 333 PT*ESFCPI-PTITP*WRGLPTIEGNTARGASSPAKPALHIPEPLSTTNAATSSS 172
PT S P+ PT+ P P N S P PL+TTN TS+S
Sbjct: 401 PTGNSTTPVTPTVPPTSSSTPLTTTNCTTSTSVPYTSTPVTSTPLATTNCTTSTS 455
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = -2
Query: 344 VPHLLHKSPSVPYRPSRPDGGAFPRSRGTR 255
+ L+ K+PS PY SRP A S TR
Sbjct: 306 IDQLISKAPSYPYSSSRPSASASLASSPTR 335
>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
Mam3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1082
Score = 27.9 bits (59), Expect = 2.0
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +2
Query: 476 VLLTEAPLNPK-ANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTPVSCWTPATVS-P 649
V+LT + +P ++ E +T + + + ++ S AS PVS + ATVS
Sbjct: 200 VILTTSVNSPAVSSSETLTSVSITSTESAYTSSSVDIAASTTASSTLPVST-SEATVSFS 258
Query: 650 TXCPSTRDTHSPXPSXVWTXXVXTSQT 730
T P+T T S S + V TS T
Sbjct: 259 TDIPATPSTLSSPASSSSSYLVETSST 285
>SPBC902.06 |mto2||MT organizer Mto2|Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 27.9 bits (59), Expect = 2.0
Identities = 19/59 (32%), Positives = 27/59 (45%)
Frame = +2
Query: 515 REKMTQIMFETFNTPAMYVAIQAVLSLYASGRTPVSCWTPATVSPTXCPSTRDTHSPXP 691
RE++ Q+ + P+ Y+ LS Y R+P S P+ PST HSP P
Sbjct: 134 RERLNQVELQLSERPSSYLGYHNNLSPY---RSPNSY-------PSLLPSTHSPHSPAP 182
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 27.5 bits (58), Expect = 2.6
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 572 AIQAVLSLYASGRTPVSCWTPATVSPTXCPSTRDTHSP 685
++Q + +TP S TP + T P+T DTH P
Sbjct: 266 SVQQQQKQHQQKKTPQSGSTPQMQNTTSQPTTHDTHPP 303
>SPCC622.02 |||dubious|Schizosaccharomyces pombe|chr 3|||Manual
Length = 127
Score = 27.1 bits (57), Expect = 3.4
Identities = 23/60 (38%), Positives = 28/60 (46%)
Frame = -3
Query: 373 FEGQDTSFALCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHTGAIVYY 194
F G +F CLI++IR +SH D EHG II C T L G I+YY
Sbjct: 47 FAGLGIAFIYCLIAFIRE-MSHPSSR-------KDTMEHGL-PIILCST-LMLVGNILYY 96
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.5
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = -1
Query: 336 SPT*ESFC--PIPTITP*WRGLPTIEGNTARGASSPAKPAL 220
S T +SF P+PT P LPT NT + P+ PAL
Sbjct: 64 SNTPKSFAAPPVPTGAP---SLPTSSNNTQQAEERPSMPAL 101
>SPCC1742.01 ||SPCC1795.13, SPCPB16A4.07c|sequence
orphan|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1563
Score = 26.6 bits (56), Expect = 4.5
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 590 SLYASGRTPVSCWTPATVSPTXCPSTRDTHSPXPSXVWTXXVXTSQTTS 736
S + + T SC PATV + T P P+ + V T+ TT+
Sbjct: 159 STFVADTTSTSC-NPATVLIVTTSGSTSTSCPPPTTILIVTVPTTTTTT 206
>SPBC115.01c |rrp46||exosome subunit Rrp46 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 226
Score = 26.2 bits (55), Expect = 6.0
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +2
Query: 479 LLTEAPLNPKANREKMTQIMFETFN 553
+L APL+ + +KM +++FET+N
Sbjct: 181 VLETAPLHAEEVSKKMKELLFETYN 205
>SPCC5E4.04 |cut1||separase|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1828
Score = 25.8 bits (54), Expect = 7.9
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = -2
Query: 218 TYRSHCLLPTRQLLRRTS*ISEI 150
TYR H +PT LL T +SEI
Sbjct: 168 TYRDHDAIPTATLLNPTLDVSEI 190
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 7.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -3
Query: 373 FEGQDTSFALCLISYIRVLLSHTDHHA 293
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,375,746
Number of Sequences: 5004
Number of extensions: 72592
Number of successful extensions: 208
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 201
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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