Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_M21
(861 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_56628| Best HMM Match : Actin (HMM E-Value=0) 318 5e-87
SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.) 313 1e-85
SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.) 313 1e-85
SB_56| Best HMM Match : Actin (HMM E-Value=0) 312 3e-85
SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.) 310 7e-85
SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.) 183 2e-46
SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.) 146 3e-35
SB_54| Best HMM Match : Actin (HMM E-Value=0) 100 1e-21
SB_3885| Best HMM Match : Actin (HMM E-Value=0.77) 83 3e-16
SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40) 83 4e-16
SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07) 72 7e-13
SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12) 60 3e-09
SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022) 57 2e-08
SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6) 56 3e-08
SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10) 50 2e-06
SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011) 49 6e-06
SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.39
SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.52
SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_18097| Best HMM Match : NadA (HMM E-Value=2.2) 31 0.91
SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8) 31 0.91
SB_21074| Best HMM Match : NadA (HMM E-Value=2) 31 1.2
SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0) 31 1.2
SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.6
SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8) 31 1.6
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 31 1.6
SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28) 30 2.1
SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 2.1
SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27) 30 2.1
SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42) 30 2.1
SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40) 30 2.8
SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2) 29 4.9
SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2) 29 4.9
SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39) 29 4.9
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.4
SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_56628| Best HMM Match : Actin (HMM E-Value=0)
Length = 376
Score = 318 bits (780), Expect = 5e-87
Identities = 146/149 (97%), Positives = 149/149 (100%)
Frame = +2
Query: 167 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 346
MCD++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MCDDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 347 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 526
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 527 TQIMFETFNTPAMYVAIQAVLSLYASGRT 613
TQIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRT 149
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
TGIV+DSGDGV+HTVPIYEGYALP AI D G DL DYLM ILTERGYS
Sbjct: 150 TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 200
>SB_23733| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 376
Score = 313 bits (769), Expect = 1e-85
Identities = 145/149 (97%), Positives = 148/149 (99%)
Frame = +2
Query: 167 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 346
M D+E+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MEDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 347 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 526
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 527 TQIMFETFNTPAMYVAIQAVLSLYASGRT 613
TQIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRT 149
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
TGIV+DSGDGV+HTVPIYEGYALP AI D G DL DYLM ILTERGYS
Sbjct: 150 TGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS 200
>SB_7187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 349
Score = 313 bits (769), Expect = 1e-85
Identities = 143/149 (95%), Positives = 148/149 (99%)
Frame = +2
Query: 167 MCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 346
M D+++AALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
Sbjct: 1 MADDDIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ 60
Query: 347 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 526
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
Sbjct: 61 SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM 120
Query: 527 TQIMFETFNTPAMYVAIQAVLSLYASGRT 613
TQIMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 121 TQIMFETFNSPAMYVAIQAVLSLYASGRT 149
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/24 (83%), Positives = 22/24 (91%), Gaps = 2/24 (8%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYE--GYA 678
TGIV+DSGDGVSHTVPIYE GY+
Sbjct: 150 TGIVMDSGDGVSHTVPIYEERGYS 173
>SB_56| Best HMM Match : Actin (HMM E-Value=0)
Length = 375
Score = 312 bits (765), Expect = 3e-85
Identities = 144/147 (97%), Positives = 147/147 (100%)
Frame = +2
Query: 173 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 352
++EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 353 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 532
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 533 IMFETFNTPAMYVAIQAVLSLYASGRT 613
IMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRT 148
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
TGIV+DSGDGV+HTVPIYEGYALP AI D G DL DYLM ILTERGYS
Sbjct: 149 TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
>SB_7190| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 310 bits (762), Expect = 7e-85
Identities = 143/147 (97%), Positives = 147/147 (100%)
Frame = +2
Query: 173 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 352
+++VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 EDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 353 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 532
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 533 IMFETFNTPAMYVAIQAVLSLYASGRT 613
IMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRT 148
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
TGIV+DSGDGV+HTVPIYEGYALP AI D G DL DYLM ILTERGYS
Sbjct: 149 TGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 199
>SB_23734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 338
Score = 183 bits (445), Expect = 2e-46
Identities = 83/89 (93%), Positives = 86/89 (96%)
Frame = +2
Query: 173 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 352
D++VAALV+DNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDVAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 353 RGILTLKYPIEHGIVTNWDDMEKIWHHTF 439
RGILTLKYPIEHGIVTNWDDMEKI TF
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIMFETF 90
Score = 86.6 bits (205), Expect = 2e-17
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
TGIV+DSGDGV+HTVPIYEGYALP AI D G DL DYLM ILTERGYS
Sbjct: 112 TGIVMDSGDGVTHTVPIYEGYALPHAIIRLDLAGRDLTDYLMKILTERGYS 162
Score = 59.7 bits (138), Expect = 3e-09
Identities = 28/34 (82%), Positives = 31/34 (91%)
Frame = +2
Query: 512 NREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 613
N + M +IMFETFN+PAMYVAIQAVLSLYASGRT
Sbjct: 78 NWDDMEKIMFETFNSPAMYVAIQAVLSLYASGRT 111
>SB_19204| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 146 bits (353), Expect = 3e-35
Identities = 69/144 (47%), Positives = 96/144 (66%), Gaps = 3/144 (2%)
Frame = +2
Query: 185 AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRP--RHQGVMVGMGQKDSYVGDEAQSKRG 358
+ +V DNG+G K G+AG + P +FPS+VGRP R + + KD VGDEA R
Sbjct: 7 SVIVCDNGTGFVKCGYAGSNFPAHIFPSMVGRPIIRSSQKVGDIEVKDLMVGDEASQLRY 66
Query: 359 ILTLKYPIEHGIVTNWDDMEKIWHHTF-YNELRVAPEEHPVLLTEAPLNPKANREKMTQI 535
+L + YP+++GIV NWDDM+ +W +TF +++ + P VLLTE PLNP NREKM ++
Sbjct: 67 MLEVNYPMDNGIVRNWDDMKHVWDYTFGESKMNIDPRNTKVLLTEPPLNPMKNREKMIEV 126
Query: 536 MFETFNTPAMYVAIQAVLSLYASG 607
MFE + +Y+AIQAVL+LYA G
Sbjct: 127 MFENYQFEGVYIAIQAVLTLYAQG 150
Score = 62.9 bits (146), Expect = 3e-10
Identities = 25/54 (46%), Positives = 37/54 (68%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYSXHY 774
TG+V+DSGDGV+H P+YEG+ALP D G D+ YL+ ++ RGY+ ++
Sbjct: 153 TGVVIDSGDGVTHICPVYEGFALPHLTRRLDIAGRDITKYLIKLMLLRGYAFNH 206
>SB_54| Best HMM Match : Actin (HMM E-Value=0)
Length = 2486
Score = 100 bits (240), Expect = 1e-21
Identities = 45/65 (69%), Positives = 55/65 (84%)
Frame = +2
Query: 419 KIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLY 598
K+W H F ++LRV E+ PVLLTEAPLNPK NRE+M Q+MFE+FN P MYVA+QAV++LY
Sbjct: 2130 KMWEHAF-DQLRVRGEDFPVLLTEAPLNPKMNRERMVQLMFESFNVPCMYVAVQAVMALY 2188
Query: 599 ASGRT 613
ASGRT
Sbjct: 2189 ASGRT 2193
Score = 69.7 bits (163), Expect = 3e-12
Identities = 31/51 (60%), Positives = 35/51 (68%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
TG V D GDGVSHTVP+Y+GY LP A D G DL YL ++TERGYS
Sbjct: 2194 TGTVFDCGDGVSHTVPVYDGYWLPHATQRIDLAGRDLTHYLQRLVTERGYS 2244
Score = 59.7 bits (138), Expect = 3e-09
Identities = 23/34 (67%), Positives = 30/34 (88%)
Frame = +2
Query: 191 LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 292
+V+DNGSG CKAG + D++PR VFP+IVGRPRH+
Sbjct: 2097 VVIDNGSGFCKAGLSTDESPRVVFPAIVGRPRHK 2130
>SB_3885| Best HMM Match : Actin (HMM E-Value=0.77)
Length = 152
Score = 83.0 bits (196), Expect = 3e-16
Identities = 37/51 (72%), Positives = 40/51 (78%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYS 765
TG+V DSGDGVSH VPIYEGYALP AI D G DL DYLM ++TERGYS
Sbjct: 28 TGVVFDSGDGVSHNVPIYEGYALPHAILRLDLAGRDLTDYLMKLMTERGYS 78
Score = 52.4 bits (120), Expect = 5e-07
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +2
Query: 533 IMFETFNTPAMYVAIQAVLSLYASGRT 613
IMFE FN+PA+YVAIQAVLSLYASGRT
Sbjct: 1 IMFEAFNSPAVYVAIQAVLSLYASGRT 27
>SB_27656| Best HMM Match : Actin (HMM E-Value=4.79999e-40)
Length = 367
Score = 82.6 bits (195), Expect = 4e-16
Identities = 34/49 (69%), Positives = 44/49 (89%)
Frame = +2
Query: 467 EHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 613
+HPVLLTEAPLNP+ NREK ++ FETFN PA+++++QAVLSLYA+GRT
Sbjct: 126 QHPVLLTEAPLNPRRNREKAAEVFFETFNVPALFISMQAVLSLYATGRT 174
Score = 66.9 bits (156), Expect = 2e-11
Identities = 28/53 (52%), Positives = 38/53 (71%)
Frame = +1
Query: 613 TGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTERGYSXH 771
TG+VLD+GDGVSH+VPIYEG+A+P +I D G D+ YL +L + G+ H
Sbjct: 175 TGVVLDAGDGVSHSVPIYEGFAMPHSIMRTDIAGRDVSRYLRLLLRKEGHCFH 227
>SB_6996| Best HMM Match : Actin (HMM E-Value=1.7e-07)
Length = 240
Score = 71.7 bits (168), Expect = 7e-13
Identities = 29/79 (36%), Positives = 52/79 (65%)
Frame = +2
Query: 377 PIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNT 556
PI+ G++ +WD EKI + + ++ HP+L++EA N + REK+T++MFE +N
Sbjct: 3 PIKDGMIEDWDLFEKILDYIYSKNIKSDSALHPLLMSEAAWNTRIKREKLTELMFEKYNV 62
Query: 557 PAMYVAIQAVLSLYASGRT 613
PA ++ +VL+ +A+GR+
Sbjct: 63 PAFFLCKNSVLTAFANGRS 81
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +1
Query: 616 GIVLDSGDGVSHTVPIYEGYALPXAI 693
G+V+DSG + VP+++GY L AI
Sbjct: 83 GLVIDSGATQTSAVPVHDGYVLQQAI 108
>SB_34957| Best HMM Match : PARP (HMM E-Value=4.4e-12)
Length = 1392
Score = 59.7 bits (138), Expect = 3e-09
Identities = 27/39 (69%), Positives = 29/39 (74%)
Frame = +2
Query: 176 EEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQ 292
E LV+D GS M K GFAGDDAP+ VFP IVGRPRHQ
Sbjct: 1354 EAPTPLVIDVGSHMWKVGFAGDDAPKGVFPPIVGRPRHQ 1392
>SB_49385| Best HMM Match : Actin (HMM E-Value=0.00022)
Length = 921
Score = 56.8 bits (131), Expect = 2e-08
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Frame = +2
Query: 161 FKMCDEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVG--MGQKD-SYV 331
FK+ A+V+DNG G+ K GFAGD PR + P++VG P+ +++G + KD
Sbjct: 693 FKLDSHYNRAIVLDNGCGISKIGFAGDRVPRIIQPAVVGNPQRFSMLIGDNVNVKDYKKY 752
Query: 332 GDEAQSKRGILTL 370
GD A +K G++ L
Sbjct: 753 GDAAVAKSGVMHL 765
>SB_43920| Best HMM Match : SRP-alpha_N (HMM E-Value=4.6)
Length = 372
Score = 56.4 bits (130), Expect = 3e-08
Identities = 26/60 (43%), Positives = 34/60 (56%)
Frame = +2
Query: 305 GMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 484
G+ D ++GDEA K T K+PI H IV +WD ME+ W + LR PE+H LL
Sbjct: 278 GVEDLDFFIGDEAIDKPSYAT-KWPIRHAIVEDWDLMERFWEQCIFKYLRAEPEDHYFLL 336
Score = 34.3 bits (75), Expect = 0.13
Identities = 12/20 (60%), Positives = 17/20 (85%)
Frame = +1
Query: 604 RSYTGIVLDSGDGVSHTVPI 663
R+ TG V+DSGDGV+H +P+
Sbjct: 353 RTLTGCVIDSGDGVTHVIPV 372
>SB_26136| Best HMM Match : Actin (HMM E-Value=7.2e-10)
Length = 543
Score = 50.4 bits (115), Expect = 2e-06
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +1
Query: 604 RSYTGIVLDSGDGVSHTVPIYEGYALPXAIXXXDXXGXDLXDYLMXILTER 756
R+ TG V+DSGDGV+H +P+ EGY + I G D+ ++ +L ER
Sbjct: 59 RTLTGCVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITFFVQQLLRER 109
>SB_3433| Best HMM Match : Actin (HMM E-Value=0.00011)
Length = 580
Score = 48.8 bits (111), Expect = 6e-06
Identities = 27/92 (29%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
Frame = +2
Query: 179 EVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRG 358
++A LV+D G+ K GFA + APR++ P+ + + + + ++ ++GD+ + +
Sbjct: 232 KMATLVLDCGACSQKIGFASNQAPRSI-PNAIFKAKSE-------RRKLFIGDQIEECKD 283
Query: 359 ILTLKY--PIEHGIVTNWDDMEKIWHHTFYNE 448
L Y P + G + NWD ++IW +TF E
Sbjct: 284 YSALFYVLPFQKGFLVNWDVEKQIWDYTFGKE 315
>SB_13343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 198
Score = 41.9 bits (94), Expect = 6e-04
Identities = 21/39 (53%), Positives = 27/39 (69%)
Frame = -3
Query: 289 MAGPSHDRGEHGARSIISCETGLAHTGAIVYYQRGNFFV 173
MA + D GE+G+ SI+S ETGLAHTGAI+ Q + V
Sbjct: 1 MARSADDGGENGSGSIVSGETGLAHTGAIIDNQSCDIIV 39
>SB_18737| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 696
Score = 32.7 bits (71), Expect = 0.39
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -3
Query: 160 LVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQC 44
L++L C C+K + KR + + Q+P C C C
Sbjct: 620 LLELTTCSCEKSRCKRDDLCPCKSNQMPCTEACQCMNTC 658
>SB_37084| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 32.3 bits (70), Expect = 0.52
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 172 AHLELVKLVRCRCDKMKIKRPAVTANREKQIPIAGRCPCSTQ 47
A L L+KL CRC K +R + + + IP C C+++
Sbjct: 1296 APLSLLKLTTCRCVKTACRRDDLCSCKANDIPCTEACLCTSE 1337
>SB_38756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 220
Score = 31.5 bits (68), Expect = 0.91
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = +2
Query: 368 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAP--EEHPVLLTEAPLNPKANRE 520
L+ P + +VT+++ E++ H F + P HPV++TE NP R+
Sbjct: 131 LRTPFDRDVVTHYECQEQVLDHAFSHLGINTPGGVNHPVIMTEPVCNPNYCRQ 183
>SB_37540| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 120
Score = 31.5 bits (68), Expect = 0.91
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 264 GNTARGASSPAKPALHIPEPLSTT 193
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_18097| Best HMM Match : NadA (HMM E-Value=2.2)
Length = 272
Score = 31.5 bits (68), Expect = 0.91
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 412 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 236
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 193 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 251
Query: 235 CETGLAHT 212
CET L T
Sbjct: 252 CETQLVPT 259
>SB_5400| Best HMM Match : DUF1153 (HMM E-Value=7.8)
Length = 170
Score = 31.5 bits (68), Expect = 0.91
Identities = 14/24 (58%), Positives = 16/24 (66%)
Frame = -1
Query: 264 GNTARGASSPAKPALHIPEPLSTT 193
GNT R PAKPAL++P P S T
Sbjct: 80 GNTNRRTRIPAKPALNLPSPPSKT 103
>SB_21074| Best HMM Match : NadA (HMM E-Value=2)
Length = 358
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 412 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 236
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 251 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 309
Query: 235 CETGLAHT 212
CET L T
Sbjct: 310 CETQLVLT 317
>SB_38372| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 402
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 412 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 236
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 71 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 129
Query: 235 CETGLAHT 212
CET L T
Sbjct: 130 CETQLVLT 137
>SB_2458| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 412 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 236
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 105 VVPVFKKSSKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 163
Query: 235 CETGLAHT 212
CET L T
Sbjct: 164 CETQLVLT 171
>SB_47621| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 412 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 236
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 388 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 446
Query: 235 CETGLAHT 212
CET L T
Sbjct: 447 CETQLVLT 454
>SB_15522| Best HMM Match : DUF590 (HMM E-Value=5.8)
Length = 339
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 412 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 236
V+PV S D + S +C V+LSH + H M D +HG RS S
Sbjct: 229 VVPVFKKSGKDNPENYRPISLTCICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFS 287
Query: 235 CETGLAHT 212
CET L T
Sbjct: 288 CETQLVLT 295
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 30.7 bits (66), Expect = 1.6
Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 412 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 236
V+PV S D + S +C ++LSH + H M D +HG RS S
Sbjct: 153 VVPVFKKSSKDNPENYRPISLTCICCKVMEHIVLSHLNSHTAMNNILSDL-QHGFRSGFS 211
Query: 235 CETGLAHT 212
CET L T
Sbjct: 212 CETQLVLT 219
>SB_56449| Best HMM Match : RVT_1 (HMM E-Value=0.28)
Length = 419
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 439 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 272
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 210 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 268
Query: 271 DRGEHGARSIISCETGLAHT 212
+HG R +SCET L T
Sbjct: 269 SIFQHGFRQALSCETQLVLT 288
>SB_35780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 749
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = -1
Query: 264 GNTARGASSPAKPALHIPEPLSTT 193
GNT R PAKP+L++P P S T
Sbjct: 540 GNTNRRTRIPAKPSLNLPSPPSKT 563
>SB_10843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1259
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 493 SPQPQGQQREDDPDHVRNIQHARHVRRHPSR 585
SP P+ R D+P V A HV HPSR
Sbjct: 265 SPTPKRCVRFDEPPTVEKYSKASHVTEHPSR 295
>SB_2746| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 439 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 272
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 271 DRGEHGARSIISCETGLAHT 212
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_2102| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2396
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 439 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 272
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1609 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1667
Query: 271 DRGEHGARSIISCETGLAHT 212
+HG R +SCET L T
Sbjct: 1668 SIFQHGFRQALSCETQLVLT 1687
>SB_55880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 859
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 439 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 272
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 637 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 695
Query: 271 DRGEHGARSIISCETGLAHT 212
+HG R +SCET L T
Sbjct: 696 SIFQHGFRQALSCETQLVLT 715
>SB_11764| Best HMM Match : DSHCT (HMM E-Value=1.9e-27)
Length = 1492
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 439 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 272
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 1047 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 1105
Query: 271 DRGEHGARSIISCETGLAHT 212
+HG R +SCET L T
Sbjct: 1106 SIFQHGFRQALSCETQLVLT 1125
>SB_5114| Best HMM Match : RVT_1 (HMM E-Value=1.10002e-42)
Length = 330
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Frame = -3
Query: 439 EGMMPNL---LHVIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSH 272
EG +P + V+PV S D + S +C ++LSH + H L A
Sbjct: 71 EGTLPKIWLNAMVVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNIL 129
Query: 271 DRGEHGARSIISCETGLAHT 212
+HG R +SCET L T
Sbjct: 130 SIFQHGFRQALSCETQLVLT 149
>SB_28979| Best HMM Match : RVT_1 (HMM E-Value=1.6e-40)
Length = 892
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 5/72 (6%)
Frame = -3
Query: 352 FALCLISYI--RVLLSHTDHHALMAGPSHDRGEHGARSIISCETGL---AHTGAIVYYQR 188
FA CL + V+LSH + H L A +HG R+ SCET L H A + +
Sbjct: 462 FATCLACKVMKHVVLSHLNKH-LAAHNIISNLQHGFRAGFSCETQLILAVHDWASILNKH 520
Query: 187 GNFFVAHLELVK 152
G V L+ K
Sbjct: 521 GQVDVLLLDFQK 532
>SB_38460| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 181
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/45 (40%), Positives = 22/45 (48%)
Frame = -3
Query: 346 LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIISCETGLAHT 212
+C V+LSH + H M D +HG RS SCET L T
Sbjct: 94 ICCKVMEHVVLSHLNSHTAMNNILSDL-QHGFRSGFSCETQLVLT 137
>SB_37416| Best HMM Match : ResIII (HMM E-Value=1.2)
Length = 563
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 537 CSKHSTRPPCTSPSKPCSRCTRPVVHRYRAG 629
C H+ R P T+PS PC Y AG
Sbjct: 360 CYSHARREPSTAPSLPCDLVAATSAKMYLAG 390
>SB_24270| Best HMM Match : DUF1604 (HMM E-Value=5.2)
Length = 329
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 412 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 236
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 204 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 262
Query: 235 CETGLAHT 212
CET L T
Sbjct: 263 CETQLVLT 270
>SB_10927| Best HMM Match : RVT_1 (HMM E-Value=6.6e-39)
Length = 452
Score = 29.1 bits (62), Expect = 4.9
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -3
Query: 412 VIPVSDDSVFDGVFEGQDTSFA-LCLISYIRVLLSHTDHHALMAGPSHDRGEHGARSIIS 236
V+PV S D + S +C ++LSH + H L A +HG R +S
Sbjct: 2 VVPVHKKSAKDQPQNYRPISLTCICCKIMEHIVLSHLNKH-LAANNILSIFQHGFRQALS 60
Query: 235 CETGLAHT 212
CET L T
Sbjct: 61 CETQLVLT 68
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 28.7 bits (61), Expect = 6.4
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +1
Query: 553 HARHVRRHPSRALAVRVRSYTGIVLDSGDGVSHTVPI 663
+ARH R PSR +R+ Y D DG++ ++ I
Sbjct: 42 NARHPRVEPSRCRGLRLLDYCSDKFDDDDGLTDSLDI 78
>SB_20462| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = -1
Query: 264 GNTARGASSPAKPALHIPEPLSTT 193
GNT R AKPAL++P P S T
Sbjct: 40 GNTNRRTRIQAKPALNLPSPPSKT 63
>SB_11603| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 635
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = -1
Query: 264 GNTARGASSPAKPALHIPEPLSTT 193
GNT R PAKP L IP P + T
Sbjct: 68 GNTNRRTRIPAKPTLTIPSPPTKT 91
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 28.3 bits (60), Expect = 8.5
Identities = 20/84 (23%), Positives = 33/84 (39%)
Frame = +2
Query: 434 TFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRT 613
T E VAPE + E ++P+ T + ET TP VA + ++ +
Sbjct: 4182 TMAPETTVAPET--TMAAETTVSPETTEASGTTVASETTTTPETTVAPETTMAPETTVAL 4239
Query: 614 PVSCWTPATVSPTXCPSTRDTHSP 685
+ TV+P + T +P
Sbjct: 4240 ETTMAPETTVAPETTIAPESTEAP 4263
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,628,376
Number of Sequences: 59808
Number of extensions: 671532
Number of successful extensions: 2452
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 2090
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2399
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2455286845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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