Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M18
         (856 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.4  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.4  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.4  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    21   9.4  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 404 CPDILH*KYSEKESFLPSTM 463
           CP+  +  Y+++  ++PSTM
Sbjct: 606 CPEGFNEFYNQRRRWMPSTM 625


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 404 CPDILH*KYSEKESFLPSTM 463
           CP+  +  Y+++  ++PSTM
Sbjct: 839 CPEGFNEFYNQRRRWMPSTM 858


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = +2

Query: 404 CPDILH*KYSEKESFLPSTM 463
           CP+  +  Y+++  ++PSTM
Sbjct: 839 CPEGFNEFYNQRRRWMPSTM 858


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 688 LEKTGYKNNVVLYRPKRLQNKFEXSSCCF 774
           ++K   +N V+    K  QN+ E ++C F
Sbjct: 331 IDKEDERNEVISSALKLSQNELEITACKF 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,403
Number of Sequences: 336
Number of extensions: 4352
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23659332
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)