Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M14
         (824 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051694-1|AAK93118.1|  498|Drosophila melanogaster LD23968p pro...   180   3e-45
AE014298-1133|AAF46332.1|  498|Drosophila melanogaster CG2263-PA...   180   3e-45
AY113368-1|AAM29373.1|  789|Drosophila melanogaster LD32039p pro...    29   7.7  
AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protei...    29   7.7  
AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.      29   7.7  
AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB...    29   7.7  
AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA...    29   7.7  

>AY051694-1|AAK93118.1|  498|Drosophila melanogaster LD23968p
           protein.
          Length = 498

 Score =  180 bits (437), Expect = 3e-45
 Identities = 94/178 (52%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
 Frame = +1

Query: 199 ELNERILKYLENSDKADTLKLCEEFNEEHQKIVGAVKSLEAL-EMVISEAVKITKWELTE 375
           +L ERIL++LE +DKADTL L   F E+HQKIVG++KS++A  E+V +E V      LT+
Sbjct: 4   DLTERILQHLETTDKADTLDLAALFAEDHQKIVGSLKSIQAHGELVTAETVTHKSLGLTD 63

Query: 376 EGELVANNGSHEAVLYRSIPDSGVPQSEAMKMV-PNAKVGFSKAMSSGWIYIDKSSGPPL 552
           EG  V  NGSHEA++Y  +P  G+ Q+  M     NAKVGFSKAMS GWI +DKS  PPL
Sbjct: 64  EGRAVVENGSHEALVYDLVPPEGIAQAALMAAGGANAKVGFSKAMSHGWILVDKSVTPPL 123

Query: 553 VKRKVDSITDIVQENLSEIRKGI-DNLSENVRNDYXKRXLLQEVTIKSFLLSKGPQFA 723
           V+RKVD+ITD+V+  L ++  G  D L      D+ KR LLQE T KSF+L++GP+FA
Sbjct: 124 VRRKVDTITDVVRNQLQQVALGKGDQLPAKEVADFKKRKLLQETTTKSFVLARGPEFA 181


>AE014298-1133|AAF46332.1|  498|Drosophila melanogaster CG2263-PA
           protein.
          Length = 498

 Score =  180 bits (437), Expect = 3e-45
 Identities = 94/178 (52%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
 Frame = +1

Query: 199 ELNERILKYLENSDKADTLKLCEEFNEEHQKIVGAVKSLEAL-EMVISEAVKITKWELTE 375
           +L ERIL++LE +DKADTL L   F E+HQKIVG++KS++A  E+V +E V      LT+
Sbjct: 4   DLTERILQHLETTDKADTLDLAALFAEDHQKIVGSLKSIQAHGELVTAETVTHKSLGLTD 63

Query: 376 EGELVANNGSHEAVLYRSIPDSGVPQSEAMKMV-PNAKVGFSKAMSSGWIYIDKSSGPPL 552
           EG  V  NGSHEA++Y  +P  G+ Q+  M     NAKVGFSKAMS GWI +DKS  PPL
Sbjct: 64  EGRAVVENGSHEALVYDLVPPEGIAQAALMAAGGANAKVGFSKAMSHGWILVDKSVTPPL 123

Query: 553 VKRKVDSITDIVQENLSEIRKGI-DNLSENVRNDYXKRXLLQEVTIKSFLLSKGPQFA 723
           V+RKVD+ITD+V+  L ++  G  D L      D+ KR LLQE T KSF+L++GP+FA
Sbjct: 124 VRRKVDTITDVVRNQLQQVALGKGDQLPAKEVADFKKRKLLQETTTKSFVLARGPEFA 181


>AY113368-1|AAM29373.1|  789|Drosophila melanogaster LD32039p
           protein.
          Length = 789

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 184 EELKMELNERILKYLENSDKADTLKLCEEFNEEHQKIVG 300
           EE + E  E I +  ENSD A  +KL     E+HQ+ VG
Sbjct: 86  EEEEEEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDVG 124


>AF119716-1|AAD17276.1| 1982|Drosophila melanogaster dMi-2 protein
            protein.
          Length = 1982

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 184  EELKMELNERILKYLENSDKADTLKLCEEFNEEHQKIVG 300
            EE + E  E I +  ENSD A  +KL     E+HQ+ VG
Sbjct: 1279 EEEEEEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDVG 1317


>AF007780-1|AAB87384.1| 1518|Drosophila melanogaster CHD3 protein.
          Length = 1518

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 184 EELKMELNERILKYLENSDKADTLKLCEEFNEEHQKIVG 300
           EE + E  E I +  ENSD A  +KL     E+HQ+ VG
Sbjct: 815 EEEEEEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDVG 853


>AE014296-3240|AAX52739.1| 1983|Drosophila melanogaster CG8103-PB,
            isoform B protein.
          Length = 1983

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 184  EELKMELNERILKYLENSDKADTLKLCEEFNEEHQKIVG 300
            EE + E  E I +  ENSD A  +KL     E+HQ+ VG
Sbjct: 1280 EEEEEEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDVG 1318


>AE014296-3239|AAF49099.2| 1982|Drosophila melanogaster CG8103-PA,
            isoform A protein.
          Length = 1982

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 17/39 (43%), Positives = 22/39 (56%)
 Frame = +1

Query: 184  EELKMELNERILKYLENSDKADTLKLCEEFNEEHQKIVG 300
            EE + E  E I +  ENSD A  +KL     E+HQ+ VG
Sbjct: 1279 EEEEEEETEIIKQDAENSDPAYWVKLLRHHYEQHQEDVG 1317


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,890,713
Number of Sequences: 53049
Number of extensions: 568022
Number of successful extensions: 1798
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1792
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3901127880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)