Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_M13
(839 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11360| Best HMM Match : PDZ (HMM E-Value=0) 218 5e-57
SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.) 120 1e-27
SB_33618| Best HMM Match : Guanylate_kin (HMM E-Value=6.3e-13) 77 2e-14
SB_17677| Best HMM Match : No HMM Matches (HMM E-Value=.) 73 4e-13
SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33) 72 7e-13
SB_48455| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21) 69 5e-12
SB_45036| Best HMM Match : Guanylate_kin (HMM E-Value=0) 54 1e-07
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 3e-07
SB_31498| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 6e-04
SB_58446| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.2
SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31) 28 8.2
>SB_11360| Best HMM Match : PDZ (HMM E-Value=0)
Length = 625
Score = 218 bits (532), Expect = 5e-57
Identities = 113/179 (63%), Positives = 133/179 (74%)
Frame = +3
Query: 27 LGPLKXXINDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFI 206
LGPLK INDDLISEFPDKFGSCVPHTTRPRRDYE DG DYH V
Sbjct: 462 LGPLKDRINDDLISEFPDKFGSCVPHTTRPRRDYEKDGLDYHFVD--------------- 506
Query: 207 EAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIM 386
A ++N+ + T+ +S KHCILDVSG AIKRLQVA L+PIAIFIKPKS+ESI
Sbjct: 507 RARRWNEP-FRTTCSS-----RLSKHCILDVSGYAIKRLQVAGLYPIAIFIKPKSMESIR 560
Query: 387 EMNKRMTEEQAKKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
E+NKR+TEEQA+KT++RALK+EQEF EYFTA+V GDT +E+Y++VK VI SGP +WV
Sbjct: 561 ELNKRLTEEQAQKTFDRALKLEQEFGEYFTAIVQGDTYDELYNRVKEVIRQQSGPVIWV 619
>SB_59147| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 574
Score = 120 bits (289), Expect = 1e-27
Identities = 60/182 (32%), Positives = 102/182 (56%), Gaps = 10/182 (5%)
Frame = +3
Query: 48 INDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYND 227
+ + LI +FG+ +PHT+R R+ E GR Y V SRE+MERDI+ ++E G+Y
Sbjct: 376 LKNKLIMSDRKRFGTTIPHTSRQMREGEQSGRGYFFV-SREEMERDIRAGKYLEFGEYGG 434
Query: 228 NLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIME------ 389
N+YGT + ++REV GK C++DV+ A+K L+ + P + I S E + E
Sbjct: 435 NMYGTKIDTIREVMRSGKMCVVDVNPTALKVLKTPEFMPYIVCIASPSFEELKEFQSKAL 494
Query: 390 ----MNKRMTEEQAKKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSV 557
+NK+ ++++ +KT E + ++ +A YF + D EE ++K++ I + S
Sbjct: 495 SEGIVNKKRSDDELRKTVEDSERLYNSYAHYFDLTIANDNVEEAFNKLQNAIESLSTHPQ 554
Query: 558 WV 563
W+
Sbjct: 555 WI 556
>SB_33618| Best HMM Match : Guanylate_kin (HMM E-Value=6.3e-13)
Length = 171
Score = 76.6 bits (180), Expect = 2e-14
Identities = 49/166 (29%), Positives = 79/166 (47%), Gaps = 13/166 (7%)
Frame = +3
Query: 105 TTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 284
T+RP + E++ DYH V R DI H F+E G+ D+ YGTS +++ V GK
Sbjct: 2 TSRPIKPGEINDHDYHFVP-RHTFVTDIVAHKFVEHGELQDHFYGTSFDAIKMVINAGKT 60
Query: 285 CILDVSGNAIKRLQVAQLF-PIAIFIKPKSVESIM------------EMNKRMTEEQAKK 425
CIL++ + +K Q F P IFI S E + ++N +T+ + +
Sbjct: 61 CILNLHCH-LKTSSCHQTFKPYVIFISSPSYERVRALRRGKIDPFNPKLNVALTDREIHE 119
Query: 426 TYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
+A +ME+ + YF +T E + +++ VIA WV
Sbjct: 120 MVAKAREMEEAYGHYFDHTITNTDFERTFDELRQVIARLEDEPQWV 165
>SB_17677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 685
Score = 72.5 bits (170), Expect = 4e-13
Identities = 36/72 (50%), Positives = 46/72 (63%)
Frame = +3
Query: 84 FGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVRE 263
+ + VPHT+R R YE +GR+Y+ V SR ME QN FIE G++ LYGTSV S++
Sbjct: 473 YTTAVPHTSRRMRPYEANGREYYFV-SRTTMENYAQNSKFIEYGEFRKCLYGTSVDSIKR 531
Query: 264 VAEKGKHCILDV 299
V GK CIL V
Sbjct: 532 VIRTGKMCILKV 543
>SB_44409| Best HMM Match : PDZ (HMM E-Value=7.1e-33)
Length = 718
Score = 71.7 bits (168), Expect = 7e-13
Identities = 33/80 (41%), Positives = 47/80 (58%)
Frame = +3
Query: 60 LISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYG 239
LI PD+F +PHT+RP + E++ DYH V R DI H F+E G+ D+ YG
Sbjct: 606 LIQYDPDRFAGAIPHTSRPIKPGEINDHDYHFVP-RHTFVTDIVAHKFVEHGELQDHFYG 664
Query: 240 TSVASVREVAEKGKHCILDV 299
TS +++ V GK CIL++
Sbjct: 665 TSFDAIKMVINAGKTCILNL 684
>SB_48455| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 622
Score = 70.1 bits (164), Expect = 2e-12
Identities = 43/161 (26%), Positives = 79/161 (49%), Gaps = 8/161 (4%)
Frame = +3
Query: 105 TTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKH 284
TTR R E DG+ Y+ V S E M DI+++ ++E G + +YGT + ++ ++ E K
Sbjct: 457 TTRDPRAGEEDGKHYYFV-SAEVMMSDIESNRYLEYGTHEGAMYGTKLDTITDIIENHKV 515
Query: 285 CILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEM-----NKRMTE---EQAKKTYERA 440
ILDV A+K L+ A+ P +FI S++ I ++ N E E K+ + +
Sbjct: 516 AILDVEPQALKILRTAKFTPYVVFISAPSIKGINDIRPPVANHEPAEDAGESLKRLAKES 575
Query: 441 LKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
++ Q + F + + +E ++++ + WV
Sbjct: 576 DQLRQTYGHLFDLTIVNNDIDETIAQLEEALERLGTTPQWV 616
>SB_37439| Best HMM Match : Guanylate_kin (HMM E-Value=2.3e-21)
Length = 609
Score = 68.9 bits (161), Expect = 5e-12
Identities = 49/171 (28%), Positives = 76/171 (44%), Gaps = 6/171 (3%)
Frame = +3
Query: 60 LISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYG 239
L EFPD FG V HTTRP R E G+DY V ++E+ E + + LF+E Q LYG
Sbjct: 341 LCQEFPDFFGIGVSHTTRPPRKKEEHGQDYFFV-NKEEFEHGVMSGLFLETCQVGGFLYG 399
Query: 240 TSVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKP---KSVESIMEMNKRMTE 410
+ +V VA +G + + + + P + + P K+ E M+ +E
Sbjct: 400 VTREAVECVAREGLAAVFTMELEGVLSFKNTYFEPRYVLVVPINRKAHEGRMQELGYYSE 459
Query: 411 EQAKKTYERA---LKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPS 554
Q +R L ++ +F + D E Y ++K +I G S
Sbjct: 460 AQITHAIDRVEMYLSKHRDNPGFFDMAINSDDLNEAYRRLKHLIMEYLGMS 510
>SB_45036| Best HMM Match : Guanylate_kin (HMM E-Value=0)
Length = 288
Score = 54.4 bits (125), Expect = 1e-07
Identities = 45/152 (29%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Frame = +3
Query: 96 VPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEK 275
V HTTR R E DG Y+ V SRE + I F+E + N YGTS V E +
Sbjct: 36 VSHTTRAMRPGEEDGVHYNFV-SREAFDSLITAGNFLEYAEVFTNKYGTSRIWVEEQLAQ 94
Query: 276 GKHCILDVSGNAIKRLQVAQLFP--IAIFIKPKSVESIMEMNKRMTEEQAKKTYERALKM 449
G IL++ + QV +L P +++FI P S E + ++ + R +
Sbjct: 95 GTDVILEIDWQGAQ--QVRKLMPNAVSVFILPPSKEELRRRLTGRGQDSEEVIDHRMSEA 152
Query: 450 EQEFAEY--FTAVVTGDTPEEIYSKVKAVIAA 539
E Y F V+ D ++ +++AV A
Sbjct: 153 VSEMVHYPEFDYVIINDDFDQALVQLQAVFTA 184
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 52.8 bits (121), Expect = 3e-07
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 5/85 (5%)
Frame = +3
Query: 279 KHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRM--TEEQA---KKTYERAL 443
+HC+LD++ + ++RL QL+PI I I K +I E+ M ++E A KK ++
Sbjct: 1224 QHCLLDIAPDEVERLNYCQLYPIVIHIDVKDKNAIKELRTSMGQSKESAKHIKKLFDDEA 1283
Query: 444 KMEQEFAEYFTAVVTGDTPEEIYSK 518
K+++++ FT VT T E+ K
Sbjct: 1284 KLKKKYTHLFTTSVTAGTEPELKLK 1308
>SB_31498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 41.9 bits (94), Expect = 6e-04
Identities = 20/74 (27%), Positives = 43/74 (58%)
Frame = +3
Query: 162 SREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLF 341
S E++E+ + ++ L+ ++++++ V +K H +L VS +A++RL Q++
Sbjct: 360 SEEKIEKKVAEGKLVDYTWKAGQLHCLTLSAIKNVTDK--HLLLTVSPHAVERLHALQVY 417
Query: 342 PIAIFIKPKSVESI 383
PI +++K KS I
Sbjct: 418 PIVLYVKFKSFRQI 431
>SB_58446| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 591
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 190 RITCSSRPASTTTICTERPWHPCEKSPRRASIAFWTSAV 306
RI+ ++ +++T+C +P P + RA + W S++
Sbjct: 193 RISVHAKTTASSTVCLVKPNSPTQTRVARAGLNMWLSSI 231
>SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 28.7 bits (61), Expect = 6.2
Identities = 21/82 (25%), Positives = 33/82 (40%)
Frame = +2
Query: 182 RHTESPVHRGRPVQRQSVRNVRGIRARSRREGQALHFGRQR*RNQEIASSTTIPYCHIYQ 361
R + HR R QRQ R + R R R+ + RQR R ++ Q
Sbjct: 41 RQRQRQRHRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRQRLRQRQRLRQRQ 100
Query: 362 TKECRVYNGNEQENDRRTSEEN 427
+ + N N+ +ND R ++
Sbjct: 101 RQRQQQRNDNDNDNDNRNDNDH 122
>SB_55909| Best HMM Match : Sushi (HMM E-Value=2.3e-31)
Length = 526
Score = 28.3 bits (60), Expect = 8.2
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 288 CNACPSRRLLARMPRTFRTDCRC 220
CNACP++ A + T DC+C
Sbjct: 297 CNACPAKSSTAGLGSTNIVDCKC 319
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,284,364
Number of Sequences: 59808
Number of extensions: 336628
Number of successful extensions: 1084
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1074
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2371447782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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