Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP01_FL5_M13
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila disc... 184 5e-47
AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein... 184 5e-47
AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like pr... 184 5e-47
Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical pr... 100 1e-21
Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical pr... 100 1e-21
X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein. 100 1e-21
X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein. 100 1e-21
AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical ... 85 4e-17
U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical pr... 75 6e-14
U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical pr... 75 6e-14
U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical p... 73 3e-13
U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily ass... 71 8e-13
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 62 4e-10
AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical... 47 1e-05
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical... 47 1e-05
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 42 5e-04
Z70309-5|CAB54290.2| 402|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z70309-4|CAA94359.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z54236-3|CAA90985.1| 196|Caenorhabditis elegans Hypothetical pr... 28 7.2
AF098995-7|AAC67481.1| 253|Caenorhabditis elegans F-box b prote... 28 7.2
Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical pr... 28 9.5
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 28 9.5
>U39742-7|AAK39197.2| 967|Caenorhabditis elegans Drosophila discs
large homologprotein 1, isoform a protein.
Length = 967
Score = 184 bits (449), Expect = 5e-47
Identities = 92/191 (48%), Positives = 133/191 (69%), Gaps = 12/191 (6%)
Frame = +3
Query: 27 LGPLKXXINDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFI 206
LG LK IND+L++ P KF SCVPHT+RP R+ EV+GRDY+ V ++ ME D++N+LFI
Sbjct: 775 LGALKDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFV-NKHNMEEDVKNNLFI 833
Query: 207 EAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQV-AQLFPIAIFIKPKSVESI 383
EAGQ+ +NLYGTS+ SVR+VA +G+HCILDVSGNAI+RLQ A + PI+IFIKP S + I
Sbjct: 834 EAGQFQNNLYGTSIQSVRDVANQGRHCILDVSGNAIRRLQSNANIQPISIFIKPSSAQQI 893
Query: 384 MEM----------NKRMTEEQAKKTYERALKMEQEFAEYFTAVVTG-DTPEEIYSKVKAV 530
+E+ ++ M+ E+A+ Y R ++EQ F + FT ++ + ++ SKV ++
Sbjct: 894 LELDSQLATNRQDDRAMSGEEAQAQYSRCHRIEQTFGDLFTQEISNVHSANDVLSKVYSI 953
Query: 531 IAAXSGPSVWV 563
I+ S +WV
Sbjct: 954 ISRESQTPIWV 964
>AJ295228-1|CAC35153.1| 967|Caenorhabditis elegans MAGUK protein
DLG-1 protein.
Length = 967
Score = 184 bits (449), Expect = 5e-47
Identities = 92/191 (48%), Positives = 133/191 (69%), Gaps = 12/191 (6%)
Frame = +3
Query: 27 LGPLKXXINDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFI 206
LG LK IND+L++ P KF SCVPHT+RP R+ EV+GRDY+ V ++ ME D++N+LFI
Sbjct: 775 LGALKDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFV-NKHNMEEDVKNNLFI 833
Query: 207 EAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQV-AQLFPIAIFIKPKSVESI 383
EAGQ+ +NLYGTS+ SVR+VA +G+HCILDVSGNAI+RLQ A + PI+IFIKP S + I
Sbjct: 834 EAGQFQNNLYGTSIQSVRDVANQGRHCILDVSGNAIRRLQSNANIQPISIFIKPSSAQQI 893
Query: 384 MEM----------NKRMTEEQAKKTYERALKMEQEFAEYFTAVVTG-DTPEEIYSKVKAV 530
+E+ ++ M+ E+A+ Y R ++EQ F + FT ++ + ++ SKV ++
Sbjct: 894 LELDSQLATNRQDDRAMSGEEAQAQYSRCHRIEQTFGDLFTQEISNVHSANDVLSKVYSI 953
Query: 531 IAAXSGPSVWV 563
I+ S +WV
Sbjct: 954 ISRESQTPIWV 964
>AF406786-1|AAL01376.1| 967|Caenorhabditis elegans SAP97-like protein
DLG-1 protein.
Length = 967
Score = 184 bits (449), Expect = 5e-47
Identities = 92/191 (48%), Positives = 133/191 (69%), Gaps = 12/191 (6%)
Frame = +3
Query: 27 LGPLKXXINDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFI 206
LG LK IND+L++ P KF SCVPHT+RP R+ EV+GRDY+ V ++ ME D++N+LFI
Sbjct: 775 LGALKDRINDELVNRDPSKFSSCVPHTSRPPREGEVNGRDYYFV-NKHNMEEDVKNNLFI 833
Query: 207 EAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQV-AQLFPIAIFIKPKSVESI 383
EAGQ+ +NLYGTS+ SVR+VA +G+HCILDVSGNAI+RLQ A + PI+IFIKP S + I
Sbjct: 834 EAGQFQNNLYGTSIQSVRDVANQGRHCILDVSGNAIRRLQSNANIQPISIFIKPSSAQQI 893
Query: 384 MEM----------NKRMTEEQAKKTYERALKMEQEFAEYFTAVVTG-DTPEEIYSKVKAV 530
+E+ ++ M+ E+A+ Y R ++EQ F + FT ++ + ++ SKV ++
Sbjct: 894 LELDSQLATNRQDDRAMSGEEAQAQYSRCHRIEQTFGDLFTQEISNVHSANDVLSKVYSI 953
Query: 531 IAAXSGPSVWV 563
I+ S +WV
Sbjct: 954 ISRESQTPIWV 964
>Z50873-2|CAA90759.2| 620|Caenorhabditis elegans Hypothetical
protein F17E5.1b protein.
Length = 620
Score = 100 bits (239), Expect = 1e-21
Identities = 50/172 (29%), Positives = 93/172 (54%)
Frame = +3
Query: 48 INDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYND 227
I + LI P++F +PHTTRP R EVDG+ Y+ V + EQM DIQN+ ++E G + +
Sbjct: 449 IKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTN-EQMMADIQNNEYLEYGTHEE 507
Query: 228 NLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMT 407
++YGT + ++R + + GK ILDV A+K L+ A+ P +FI +++ + +
Sbjct: 508 SMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFVVFIAAPNLQGMQD-----P 562
Query: 408 EEQAKKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
+ +K + + Q F F ++T ++ ++++ ++ W+
Sbjct: 563 DGSLEKLLNESDVLRQAFGHLFDFIITNSDIDDTIAQLERLVEKLPAYPQWL 614
>Z50873-1|CAA90760.2| 961|Caenorhabditis elegans Hypothetical protein
F17E5.1a protein.
Length = 961
Score = 100 bits (239), Expect = 1e-21
Identities = 50/172 (29%), Positives = 93/172 (54%)
Frame = +3
Query: 48 INDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYND 227
I + LI P++F +PHTTRP R EVDG+ Y+ V + EQM DIQN+ ++E G + +
Sbjct: 790 IKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTN-EQMMADIQNNEYLEYGTHEE 848
Query: 228 NLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMT 407
++YGT + ++R + + GK ILDV A+K L+ A+ P +FI +++ + +
Sbjct: 849 SMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFVVFIAAPNLQGMQD-----P 903
Query: 408 EEQAKKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
+ +K + + Q F F ++T ++ ++++ ++ W+
Sbjct: 904 DGSLEKLLNESDVLRQAFGHLFDFIITNSDIDDTIAQLERLVEKLPAYPQWL 955
>X92565-1|CAA63315.1| 620|Caenorhabditis elegans LIN-2B protein.
Length = 620
Score = 100 bits (239), Expect = 1e-21
Identities = 50/172 (29%), Positives = 93/172 (54%)
Frame = +3
Query: 48 INDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYND 227
I + LI P++F +PHTTRP R EVDG+ Y+ V + EQM DIQN+ ++E G + +
Sbjct: 449 IKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTN-EQMMADIQNNEYLEYGTHEE 507
Query: 228 NLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMT 407
++YGT + ++R + + GK ILDV A+K L+ A+ P +FI +++ + +
Sbjct: 508 SMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFVVFIAAPNLQGMQD-----P 562
Query: 408 EEQAKKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
+ +K + + Q F F ++T ++ ++++ ++ W+
Sbjct: 563 DGSLEKLLNESDVLRQAFGHLFDFIITNSDIDDTIAQLERLVEKLPAYPQWL 614
>X92564-1|CAA63314.1| 961|Caenorhabditis elegans LIN-2A protein.
Length = 961
Score = 100 bits (239), Expect = 1e-21
Identities = 50/172 (29%), Positives = 93/172 (54%)
Frame = +3
Query: 48 INDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYND 227
I + LI P++F +PHTTRP R EVDG+ Y+ V + EQM DIQN+ ++E G + +
Sbjct: 790 IKNTLIHRHPNRFAYPIPHTTRPPRKDEVDGKHYYFVTN-EQMMADIQNNEYLEYGTHEE 848
Query: 228 NLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMT 407
++YGT + ++R + + GK ILDV A+K L+ A+ P +FI +++ + +
Sbjct: 849 SMYGTKLETIRNIHKSGKIAILDVEPQALKVLRTAEYSPFVVFIAAPNLQGMQD-----P 903
Query: 408 EEQAKKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
+ +K + + Q F F ++T ++ ++++ ++ W+
Sbjct: 904 DGSLEKLLNESDVLRQAFGHLFDFIITNSDIDDTIAQLERLVEKLPAYPQWL 955
>AC024824-6|AAK85504.2| 567|Caenorhabditis elegans Hypothetical
protein Y55B1BR.4 protein.
Length = 567
Score = 84.6 bits (200), Expect(2) = 4e-17
Identities = 41/98 (41%), Positives = 64/98 (65%)
Frame = +3
Query: 72 FPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYGTSVA 251
F D+F + +PHT+RP+R E DG +Y+ SR +MER I+ +E G++ DNLYGT++
Sbjct: 367 FADRFTNAIPHTSRPQRPNESDGVNYYFT-SRSEMERMIERKEMLEYGEFRDNLYGTALK 425
Query: 252 SVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKP 365
SVR+ +EKG +L AI+ ++ + PI IF++P
Sbjct: 426 SVRKASEKGT-VLLTPHPLAIENIRTWEFAPIVIFVQP 462
Score = 21.4 bits (43), Expect(2) = 4e-17
Identities = 7/56 (12%), Positives = 27/56 (48%)
Frame = +3
Query: 396 KRMTEEQAKKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
+ ++ + ++ + + +MEQ++ Y A++ + +++ +I + W+
Sbjct: 502 RAFSDVEIRQIIDNSAQMEQKYRGYCDAIIRNVDLDTTMNELTGLIYQLESKATWM 557
>U88169-7|ABQ13064.1| 205|Caenorhabditis elegans Hypothetical
protein T03F1.8b protein.
Length = 205
Score = 74.9 bits (176), Expect = 6e-14
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Frame = +3
Query: 63 ISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYGT 242
+ E+P+ F V HTTR R E G+ Y+ +E+M+ I+N+ F+E ++ N YGT
Sbjct: 34 MQEYPNSFAFSVSHTTRQPRAGEEHGKHYYFT-EKEKMQEMIKNNEFLEFATFSGNTYGT 92
Query: 243 SVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRM---TEE 413
S +V E+ GK C+LD+ ++ ++ + L I I+ S++ + E + TEE
Sbjct: 93 SKKTVLEIENSGKICVLDIELQGVRNIKNSHLDARYILIRAPSIKLLEERLRARGTETEE 152
Query: 414 QAKKTYERALKMEQEFAE---YFTAVVTGDTPEEIYSK 518
K + A + E + F V+ D E Y +
Sbjct: 153 SLSKRLQHASEDLVEIEKNPTLFDKVIVNDDLERAYKE 190
>U88169-6|AAB42236.2| 216|Caenorhabditis elegans Hypothetical
protein T03F1.8a protein.
Length = 216
Score = 74.9 bits (176), Expect = 6e-14
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 6/158 (3%)
Frame = +3
Query: 63 ISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYGT 242
+ E+P+ F V HTTR R E G+ Y+ +E+M+ I+N+ F+E ++ N YGT
Sbjct: 45 MQEYPNSFAFSVSHTTRQPRAGEEHGKHYYFT-EKEKMQEMIKNNEFLEFATFSGNTYGT 103
Query: 243 SVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRM---TEE 413
S +V E+ GK C+LD+ ++ ++ + L I I+ S++ + E + TEE
Sbjct: 104 SKKTVLEIENSGKICVLDIELQGVRNIKNSHLDARYILIRAPSIKLLEERLRARGTETEE 163
Query: 414 QAKKTYERALKMEQEFAE---YFTAVVTGDTPEEIYSK 518
K + A + E + F V+ D E Y +
Sbjct: 164 SLSKRLQHASEDLVEIEKNPTLFDKVIVNDDLERAYKE 201
>U80445-11|AAB37801.2| 479|Caenorhabditis elegans Hypothetical
protein C50F2.8 protein.
Length = 479
Score = 72.9 bits (171), Expect = 3e-13
Identities = 37/122 (30%), Positives = 64/122 (52%)
Frame = +3
Query: 27 LGPLKXXINDDLISEFPDKFGSCVPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFI 206
+G + I L+ P F + VP T+R +R EV+GR+Y V +E++ + I+ +
Sbjct: 292 VGTGRRDIKSMLLRLAPHYFSTIVPLTSRAQRPGEVEGREYQFVR-KEEIYQKIREGGMV 350
Query: 207 EAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIM 386
E G+ + LYGTS SVR G+ C+LD + ++ L A+ P + + P +E
Sbjct: 351 EWGELDSQLYGTSADSVRNEIRSGRMCVLDAAPQSVNYLYNAEFMPFVVHVVPPPIEEFT 410
Query: 387 EM 392
++
Sbjct: 411 QL 412
>U53147-4|AAA96115.1| 668|Caenorhabditis elegans Temporarily
assigned gene nameprotein 117 protein.
Length = 668
Score = 71.3 bits (167), Expect = 8e-13
Identities = 38/161 (23%), Positives = 82/161 (50%), Gaps = 5/161 (3%)
Frame = +3
Query: 96 VPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEK 275
VP+T+R ++ E +G YH V S+++ D ++ F+E G+Y YGT+ V V E+
Sbjct: 502 VPYTSRTPKEGEFNGVHYHFV-SKQKFHEDAKSGKFVEFGEYQKFWYGTAKKDVVNVIER 560
Query: 276 GKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSV-----ESIMEMNKRMTEEQAKKTYERA 440
GK C++ + ++ ++ + P IFI S+ + +E + +++ K ++
Sbjct: 561 GKTCVMTLKAESLGAIRSPDIQPYIIFIAAPSLYILRRQREVEGTFGVKDDELKAILTQS 620
Query: 441 LKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
+EQ++ F ++ E+ + ++K ++ + +WV
Sbjct: 621 KSIEQKYGHLFDGIIVNIDFEKSFRELKQILMKVNTEPMWV 661
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 62.5 bits (145), Expect = 4e-10
Identities = 36/120 (30%), Positives = 73/120 (60%), Gaps = 9/120 (7%)
Frame = +3
Query: 153 LVASREQMERDIQNHLFIEAGQYNDNLYG----TSVASVREVAEKGKHCILDVSGNAIKR 320
L AS +++ +++ + I++ Q ND++Y S A + ++ +G HC+L V +AI R
Sbjct: 878 LTASLDEVSALLKDKVLIDSKQ-NDDVYDLYHVVSTAHIMDITAQGLHCVLQVDQSAIDR 936
Query: 321 LQVAQLFPIAIFIKPKSVESIMEMN-----KRMTEEQAKKTYERALKMEQEFAEYFTAVV 485
L+ ++FPI + I+ KSV+ + ++N ++++ ++AK+ E+ LK+E++ T VV
Sbjct: 937 LKRCRMFPILVKIRFKSVKQLKDVNEHICGEKISSKEAKQLIEKDLKIEKDLDGSVTLVV 996
>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
protein Y105E8A.26b protein.
Length = 1133
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +3
Query: 246 VASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEE--QA 419
++SV V KHC+LD+S +++RLQ+AQ PI +F+ I E+ K+ +
Sbjct: 598 LSSVDHVIASMKHCVLDISIESVERLQLAQYAPIVVFLDVDGRSKIREIRKKCNAPHLSS 657
Query: 420 KKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
+K E ++++ + +A + + ++ +I +W+
Sbjct: 658 RKLAENGNQIKKHHSHLLSATIDATHETGWFDALRELIGHLQQRRLWM 705
>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
protein Y105E8A.26a protein.
Length = 1172
Score = 47.2 bits (107), Expect = 1e-05
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 2/108 (1%)
Frame = +3
Query: 246 VASVREVAEKGKHCILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEE--QA 419
++SV V KHC+LD+S +++RLQ+AQ PI +F+ I E+ K+ +
Sbjct: 598 LSSVDHVIASMKHCVLDISIESVERLQLAQYAPIVVFLDVDGRSKIREIRKKCNAPHLSS 657
Query: 420 KKTYERALKMEQEFAEYFTAVVTGDTPEEIYSKVKAVIAAXSGPSVWV 563
+K E ++++ + +A + + ++ +I +W+
Sbjct: 658 RKLAENGNQIKKHHSHLLSATIDATHETGWFDALRELIGHLQQRRLWM 705
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 41.9 bits (94), Expect = 5e-04
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +3
Query: 96 VPHTTRPRRDYEVDGRDYHLVASREQMERDIQNHLFIEAGQYNDNLYGT 242
VP+TTRP R+ EVDG Y V S + + + + +E G Y +LYGT
Sbjct: 232 VPYTTRPPREGEVDGEHYRFV-SVDDFNKLLDSGDLLENGTYQGHLYGT 279
>Z70309-5|CAB54290.2| 402|Caenorhabditis elegans Hypothetical
protein R102.5b protein.
Length = 402
Score = 29.1 bits (62), Expect = 4.1
Identities = 30/118 (25%), Positives = 52/118 (44%)
Frame = +3
Query: 153 LVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVA 332
LV S + E +QN + + ++N +VA V + +L VS +LQ A
Sbjct: 103 LVNSSQSPEFTLQNMSIVSESECSNNSSLVNVADVESTEIALRTSLLLVS-ELKSQLQAA 161
Query: 333 QLFPIAIFIKPKSVESIMEMNKRMTEEQAKKTYERALKMEQEFAEYFTAVVTGDTPEE 506
++ + +K S I E NK+++E+ E LKM++ A + D+ E
Sbjct: 162 KMSESTL-LKSNSNHEIEE-NKKLSEKMEVMKNEFELKMQESAASVEKVIQEKDSAIE 217
>Z70309-4|CAA94359.2| 388|Caenorhabditis elegans Hypothetical
protein R102.5a protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.1
Identities = 30/118 (25%), Positives = 52/118 (44%)
Frame = +3
Query: 153 LVASREQMERDIQNHLFIEAGQYNDNLYGTSVASVREVAEKGKHCILDVSGNAIKRLQVA 332
LV S + E +QN + + ++N +VA V + +L VS +LQ A
Sbjct: 103 LVNSSQSPEFTLQNMSIVSESECSNNSSLVNVADVESTEIALRTSLLLVS-ELKSQLQAA 161
Query: 333 QLFPIAIFIKPKSVESIMEMNKRMTEEQAKKTYERALKMEQEFAEYFTAVVTGDTPEE 506
++ + +K S I E NK+++E+ E LKM++ A + D+ E
Sbjct: 162 KMSESTL-LKSNSNHEIEE-NKKLSEKMEVMKNEFELKMQESAASVEKVIQEKDSAIE 217
>Z68319-4|CAA92702.1| 884|Caenorhabditis elegans Hypothetical
protein T23G7.4 protein.
Length = 884
Score = 28.7 bits (61), Expect = 5.4
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -1
Query: 320 SLDCVTADVQNAMLALLGDFSHGCHGRS----VQIVVVLAGLDEQVILYVAL 177
+++C+ V NA+ ALL FS S QIV+ L GL+E + Y L
Sbjct: 776 AIECLQQTVSNALDALLLHFSRLNQDTSPLIVTQIVIDLTGLEEALSTYATL 827
>Z54236-3|CAA90985.1| 196|Caenorhabditis elegans Hypothetical
protein C27B7.2 protein.
Length = 196
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/29 (41%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = -1
Query: 434 FISFLRLFFCHSLVHFHYRLYTL-WFDKY 351
++SF R+ L+ F YR+ L WFD Y
Sbjct: 122 YVSFTRIIMNPRLLRFDYRMQNLSWFDGY 150
>AF098995-7|AAC67481.1| 253|Caenorhabditis elegans F-box b protein
protein 25 protein.
Length = 253
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/39 (46%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +3
Query: 36 LKXXINDDLISEFPDKFGSCVPHTTRPRRDYE-VDGRDY 149
+K IND LIS F + S TRP YE VD R Y
Sbjct: 201 IKWRINDVLISNFSNFIVSAKIFQTRPEPFYETVDKRSY 239
>Z68117-4|CAA92180.1| 589|Caenorhabditis elegans Hypothetical
protein F45E6.2 protein.
Length = 589
Score = 27.9 bits (59), Expect = 9.5
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Frame = +3
Query: 333 QLFPIAIFIKPKSVESIMEMNKR--MTEEQAKKTYERALKMEQEFAEYFTAVVTGDTPEE 506
+++ A ++ K + M+MN + + E + +T ALK F E+ VV P
Sbjct: 257 RMYAQASRMRKKEADEHMKMNLQELLQENEILRTENAALKQRLAFFEHEEPVVEVPQPFG 316
Query: 507 IYSKVKAVIAAXS 545
K K +IAA S
Sbjct: 317 RNQKKKRIIAAGS 329
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/60 (28%), Positives = 31/60 (51%)
Frame = +3
Query: 288 ILDVSGNAIKRLQVAQLFPIAIFIKPKSVESIMEMNKRMTEEQAKKTYERALKMEQEFAE 467
I+ +G A +L+ Q + + +KP + + R +++ + T ER LKME +F E
Sbjct: 817 IIQRNGLAYLKLRNWQWWRLFTKVKPLLQVTRTDDEIRAKDDELRATKERLLKMEHDFRE 876
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,804,289
Number of Sequences: 27780
Number of extensions: 246827
Number of successful extensions: 909
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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