Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M12
         (858 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    25   0.58 
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.3  
AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    23   4.1  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   4.1  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    22   7.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   7.1  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    22   7.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   7.1  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   7.1  

>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 25.4 bits (53), Expect = 0.58
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = -3

Query: 667 EIVKALKVIQIDAINKHVNENDNSKQINVLSTH 569
           E+VK L V++  A+ +     D  + I  LSTH
Sbjct: 242 EVVKILNVLKKIALRRQTTNGDLDELIVTLSTH 274


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -3

Query: 667 EIVKALKVIQIDAINKHVNENDNSKQINVLSTH 569
           E+VK L V++  A+ +     D  + I  LS H
Sbjct: 316 EVVKILNVLKKIALRRQTTNGDLDELIVTLSAH 348


>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +3

Query: 264 RRHRCLFATSFCFRYISGS-*RYIFTN 341
           + H CLF  S CF +   S   YIF N
Sbjct: 112 KSHYCLFVASNCFFWSYQSYMSYIFAN 138


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 4.1
 Identities = 12/27 (44%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = +3

Query: 264 RRHRCLFATSFCFRYISGS-*RYIFTN 341
           + H CLF  S CF +   S   YIF N
Sbjct: 112 KSHYCLFVASNCFFWSYQSYMSYIFAN 138


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 157 NGESGLRTDAKTVTHT 110
           NG+ G R++A + +HT
Sbjct: 49  NGDGGARSNADSTSHT 64


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 484 HPNKASPTPLGPIISHAVTVE 422
           H N++SPT    I S  VT++
Sbjct: 247 HLNRSSPTTATAIASATVTIQ 267


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -3

Query: 157 NGESGLRTDAKTVTHT 110
           NG+ G R++A + +HT
Sbjct: 205 NGDGGARSNADSTSHT 220


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 484 HPNKASPTPLGPIISHAVTVE 422
           H N++SPT    I S  VT++
Sbjct: 195 HLNRSSPTTATAIASATVTIQ 215


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = -3

Query: 484 HPNKASPTPLGPIISHAVTVE 422
           H N++SPT    I S  VT++
Sbjct: 378 HLNRSSPTTATAIASATVTIQ 398


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,269
Number of Sequences: 336
Number of extensions: 3759
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23763101
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)