Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP01_FL5_M12
         (858 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0953 - 33027007-33029079                                         30   2.7  
02_05_0223 - 26943210-26944623,26944741-26945666                       30   2.7  
04_04_1568 - 34475707-34476822,34476894-34477083,34477330-344774...    28   8.3  

>02_05_0953 - 33027007-33029079
          Length = 690

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 16/54 (29%), Positives = 28/54 (51%)
 Frame = -3

Query: 682 SI*SYEIVKALKVIQIDAINKHVNENDNSKQINVLSTHGPGRFPRSCHRPSMRA 521
           +I SY    A  V +ID +   +N++ ++ ++   S+ GP RF     +P M A
Sbjct: 384 TIHSYTQSVADPVARIDFLGTVINQSPSAPRVAAFSSRGPNRFAPEILKPDMIA 437


>02_05_0223 - 26943210-26944623,26944741-26945666
          Length = 779

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 528 CGQHICASTPLRWTIILTKPHRLRSAQS 445
           C +H+C S  LRW++  +K H  R A++
Sbjct: 556 CVEHLCESHALRWSMRRSKAHFFRLAEA 583


>04_04_1568 -
           34475707-34476822,34476894-34477083,34477330-34477464,
           34477571-34477668,34477789-34477979,34478784-34479286,
           34480169-34481568,34481655-34481855
          Length = 1277

 Score = 28.3 bits (60), Expect = 8.3
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -3

Query: 502 TTPLDNHPNKASPTPLGPIISHAVTVERDRDASLN 398
           TT L N P   +P+P  P ++ A+  ER+R+  LN
Sbjct: 546 TTTL-NSPETRAPSPSPPHLATAIDRERERERELN 579


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,750,110
Number of Sequences: 37544
Number of extensions: 375063
Number of successful extensions: 825
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)